Notothenia coriiceps (black rockcod): 104940954
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Entry
104940954 CDS
T04920
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104940954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104940954
04131 Membrane trafficking [BR:
ncc04131
]
104940954
03029 Mitochondrial biogenesis [BR:
ncc03029
]
104940954
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104940954
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104940954
mRNA cycle factors
P-body specific factors
104940954
Membrane trafficking [BR:
ncc04131
]
Others
Actin-binding proteins
Myosins
104940954
Mitochondrial biogenesis [BR:
ncc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104940954
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104940954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_22
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
104940954
NCBI-ProteinID:
XP_010764277
UniProt:
A0A6I9MIG7
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MTSLELYSKGARVWVPDPDAVWVSALLLKDYSPGDNNLLLQLSDGEEAHYPLASPSDLPP
PGNPDILEGENDLTALSFLHEAAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSFKLDAPENFRYTSQGGETQIPGTDD
LLDLERTRNAFTILGVQPDQQMELFRILAAVLHLGNVNIQASGRNSDRSYIDRSAKLAVT
GIRDRGGTNHLNRGYGLALTLRYTKAALVIQKTHRMVAVRQLFLMIRQATITIQAFSRGT
MARRRYRQVLVERAAVLLQARVRGWMARRAYRRVRETVVFMQCCARRRAARRELMKLKTE
ARSVEKFRELNKGMEVKLMQLQLRADQEAREAAALRETLHAEREAGSAELEALKVTVQKM
ESQKQEKPPPCPVISEKEVEERRRAEEKAAQDILQLTQELQALQREKDSFCQEKEDLSAR
LFEQEQAQEECVQQAVSEASASLRAELDEERRKYQGLLRDFTRLEQRYDNLREMSLLTEG
TKVHRRTDSTQSLSLELPSPSTAPLSPFSSFSSSFSSCLPSPEEVRRVSVTSPTLERRES
VWSFQTPMDQLMVSMDVAKDPAVKMKVEDLAHAYDAVRVANKLLESQLRSQSPSEGGGAG
GSEEARSVQLSCGSPLPGPQVSLLPSAFTAETSSCPSRSKPAVTGLLECRKKDENKLIKN
LITDVRVDSALSLPPGLPASVLFLCVHQADCSGDQTQARSLCSAAVTAMKAALKKHSKDV
DMTALWLKNACLLHDLLRQHSPRQTLDSDDIAPLTVDLSDLIRALSDLCIQAYQQLLSIT
EKRLQNIIVPAMLESETIPGLSGSTVKLVTSRKRAGSDPRPVGGDAPSMAAVLRELGALH
TALSHQALPPSQMEQAFHQLTYFISASALNSLLLRKDMCCWSRGMQIRYNVSLLEEWLRS
KGLQAGGAVATLEPLIQAVQLLQAGKKSEADAKALVQTCTALSSQQIVKILTLYTPHSDL
DERVTLNFIRTVQGLLKGSSDGQPPQLLMDVRRVFPVTFPFSPPAALHAEQLVIPDSLKI
NFLRRA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgacctcactggagctatacagcaagggagcaagggtgtgggttcctgacccggatgct
gtttgggtgtcagctctgctcctcaaggactacagccccggagataataacctgctgcta
cagctctctgatggggaggaggcccattaccctttggcgtccccctctgatctccccccg
ccggggaaccctgacatcctggagggggagaacgacctgacggctctcagcttcctccat
gaagctgctgtcctgcacaacctgcgggttcgattcctggactacagcagcatctacacg
tactgtggtatcgtgttagtggccattaatccctatgaccagctgcccatatatggagag
gaggttatcgatgcttacagcgggcaggacatggccgacatggagcctcacatcttttct
gtggccgaggaagcctaccgcaccatgaccagggaggagaaaaaccaatcgatcatcatc
agtggagagtctggctcgggtaaaacggtctcagccaaattcaccatgcgatactttgct
gtggtcggaggagcggcccagcagaccagcgtggaggagagggttctggcctccaaccca
atcatggagtctattgggaatgctaaaaccactcgcaatgacaacagtagtcgttttggg
aagtacatcgagatcggctttggcagaaaaggagacatcatcggggcgaacatgaggacg
tatctcctggagaagtctagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcctccagagagttgcctgaaatgagatcctttaaactggatgca
cctgagaatttccgctacaccagccagggaggagagacgcagattcctggtactgatgac
ctgttggacctggagcgcactcgcaacgctttcaccatcctgggtgtgcagcctgaccag
cagatggagctcttcaggatcctggcagctgttctgcacctcggaaatgtcaacatccag
gccagtgggagaaattctgaccggagttatattgataggtcggcgaagcttgccgttaca
ggcatccgggacagaggagggactaaccacctcaaccggggttatggactggccctgact
ctgcgctacactaaggctgctctagtgatccagaagacgcaccgcatggtggccgtcagg
cagctgttcctcatgatccgacaggccaccatcaccatccaggcctttagcagaggaacc
atggcccgccgcagatacagacaggtgttggtggagcgtgctgctgtgctgctccaggcg
agggtgcgtgggtggatggcgaggcgggcgtacaggcgggttcgtgagacggtggtgttc
atgcagtgctgcgcgcgccgcagggccgccaggagagagctgatgaaactgaagacagag
gcccgatccgtggagaagttcagagagctcaacaagggcatggaggtcaaactgatgcag
ctgcagctcagagccgaccaggaggccagggaggctgcagctttgagagagacgctgcac
gccgagcgagaggccggcagcgctgagctggaggctctgaaagtgacggtacagaaaatg
gagagccagaaacaagagaaacctccaccctgccccgtcatcagcgagaaggaggtggag
gaaaggaggagagctgaggagaaagctgcacaggacatcctgcaactcacacaagagttg
caagccctgcagagagaaaaggacagtttctgccaagagaaagaggatctctctgctcgc
ttgtttgaacaagaacaagcacaagaagagtgtgtgcagcaggctgtgtctgaggcgagt
gcatctctgagggcggagctggatgaggagaggaggaagtaccagggtctcctgagagac
ttcaccagactggagcagagatacgacaacctgagggagatgagtctgctcaccgagggc
accaaagtccacagaaggacggactccactcagagtctgagtttagagctcccctctccc
tccaccgccccgctgtcacccttctcatccttctcatcatccttctcatcatgcttaccc
tccccagaggaggtccgcagggtcagcgtgacttctcccaccctggagcggagagagtcg
gtgtggagcttccaaacaccaatggatcagctgatggtgagcatggacgtggccaaagac
ccggctgtgaagatgaaagtagaggacctggcgcacgcttacgatgctgtacgagtggcc
aacaaactcctggagagccagctgcgcagtcagagcccgtcagagggaggaggagctgga
ggctctgaggaggccagatcagtgcagcttagctgtggctctcctctgccagggccacag
gtctcacttctcccgtcagcgttcacagcagagacttcctcctgtccttcccgatcaaag
ccggcagtcactggtttgttggagtgcagaaagaaggatgaaaacaagctcattaaaaac
ctcatcacagacgtccgagtggacagcgccctctctcttcctcccggcctgcctgccagc
gtcctcttcctctgtgtccatcaggcggactgcagcggggatcagacgcaggcccgctcc
ctctgcagcgccgctgtcaccgccatgaaggctgctctgaagaaacacagcaaagatgta
gacatgacggctctgtggctgaagaacgcctgcctgctgcacgacctgctgcgccagcac
tccccgagacagactcttgactcggacgacatagctcctctgaccgttgatctgagtgac
ttgatccgcgccctgagcgacctctgcatccaggcctatcagcagctcctctccatcact
gaaaagcgcctgcagaacatcatcgtccctgctatgctggagagtgagaccatccccggt
ctctctggctccacggtgaagttggtaacatccagaaagcgagccggctctgacccccgg
cctgtgggaggcgatgctccctcgatggcggcggtgctgagggagctgggggcgctgcac
accgccctgtcccatcaggctctgcccccctctcagatggagcaggccttccaccagctc
acctacttcatctccgcctccgctctcaacagcctgctgctgaggaaagacatgtgctgc
tggagccgcggcatgcagatacgctataatgtgagtctgctggaggagtggctgcggagc
aaagggctgcaggcagggggcgctgttgccacactggagcccctcatccaggcggttcag
ctgctgcaggccgggaaaaagagcgaggcggatgcaaaggccctcgttcagacctgcact
gccctgtccagccagcagattgtgaagatcctgaccctctacacgccccacagtgacctc
gatgaaagagtcacactgaatttcatccgtactgtccagggtcttctgaaaggctcctct
gacggccagcctccgcagctcctcatggatgtgagacgagtgtttcctgtcacatttccc
ttctcgcctcctgccgccctccacgctgagcagttagtcatcccagactccctgaagatc
aactttctacgcagagcctag
DBGET
integrated database retrieval system
