Notothenia coriiceps (black rockcod): 104941020
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Entry
104941020 CDS
T04920
Symbol
f11r
Name
(RefSeq) LOW QUALITY PROTEIN: junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecule (CAM) interaction
ncc04517
IgSF CAM signaling
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104941020 (f11r)
04517 IgSF CAM signaling
104941020 (f11r)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104941020 (f11r)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104941020 (f11r)
04090 CD molecules [BR:
ncc04090
]
104941020 (f11r)
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
CTX family
104941020 (f11r)
CD molecules [BR:
ncc04090
]
Proteins
104941020 (f11r)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
VEGFR1-3_N_Ig-like
Ig_C17orf99
F13C5_C
C2-set_2
MtrF
Syndecan
MLANA
Oxidored_q4
C1orf162
Motif
Other DBs
NCBI-GeneID:
104941020
NCBI-ProteinID:
XP_010764357
UniProt:
A0A6I9MIQ8
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MFSTRLVSVALFFLSATGVRSFSVTTTNNKVQVKENEGTDLTCSYSADFGSNARVEWKFK
DLKGSQTYVVFDGKPTQPYAGRVTMYGNNLRINKVTRKDNGVYDCEVSAGEGQFGEVAVR
LTVMVPPSPPMCRIPSSVTTGKVAMLTCHDGDGSPPPTYKWYKNNILMPADPSKIAGFRN
ATYKLNAATGNLEYPAVTKMDSGQYYCEAVNDAGPPQRCKGLKMEVRDVNTGGIVAGVIV
ALLLVLLLVLGIWYAHKKGYLPKKAESKPKPSVVYQPTSLHSGGGEDEDGEFKQKSSFVV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaccaggttggtttcggtggctttgttcttcctctctgcaacaggtgtaaga
agcttttcagtcaccaccaccaacaacaaagtgcaggtcaaagagaatgaagggacggac
ctcacgtgctcgtattcagccgacttcggttccaacgccagggtcgagtggaaatttaaa
gacctaaaaggctcacagacgtatgtggtgtttgatgggaaaccaacacagccgtacgcc
ggccgagtgaccatgtacggcaataacctgagaatcaacaaagtgacccgtaaagataac
ggagtgtacgactgcgaagtgtccgccggcgaaggccagtttggggaagtcgcagtgagg
ctgactgtgatggtgcctccatctccgcccatgtgtcggatcccgtcctcagtgacgacg
ggcaaggtggccatgttgacctgccatgatggcgacggctcccccccccccacgtacaag
tggtacaaaaacaacatccttatgcccgccgatcccagcaagatagcaggcttccgaaac
gccacttacaagctgaatgcagccaccgggaacctggagtaccccgctgtaaccaagatg
gactccggacagtactactgtgaggctgtcaacgatgctggtcctccgcagcgctgcaaa
ggcctgaaaatggaagtccgtgacgtgaacactggaggaattgtggccggggttattgtg
gctctgctgctcgtgctgctgctggtacttggcatttggtatgcccacaagaaaggatac
ctgcccaagaaggcagagagcaaaccaaagcccagcgtggtgtaccagccgacgtctttg
cattctggtggtggtgaagatgaagatggggaattcaaacagaagtcgtcgttcgtggta
tag
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