Notothenia coriiceps (black rockcod): 104941096
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Entry
104941096 CDS
T04920
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104941096 (sox2)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104941096 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104941096
NCBI-ProteinID:
XP_010764478
UniProt:
A0A6I9MMM0
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGPGNNTSGNGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGGNGMGSGVGVGGGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQLSYQ
HPGLNAHNPSQMQSMHRYDMSALQYNSMTGSQGYMNGSPTYSMSYSQQSTPGMTALGSMG
PSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGADVSEQNAQTRLHMSGH
YQSTVPGTTINGTLPLTHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccccctgctccccaaaccaacacggggggc
ccgggcaacaacacgtccggaaacggacccaaccagaaaaacagtccggagcgggtcaag
agacccatgaacgcgttcatggtgtggtccaggggccagaggaggaagatggcgcaagaa
aaccccaaaatgcacaactcggagataagcaagaggctgggcgccgagtggaaacttctg
tccgagagcgagaagagacctttcatcgacgaagccaagaggctgagggccctgcacatg
aaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaagaag
gacaagtacaccttgcccggtgggctgctggctccgggaggaaacgggatgggatctggg
gtcggtgtggggggcgggctaggcggtggggtgaaccagcggatggacagctacgcagca
cacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctgagctaccag
cacccggggctgaacgcgcacaacccgagccagatgcagtccatgcaccgctacgacatg
agtgcgctgcagtacaacagcatgacaggctcccagggctacatgaacggctccccgaca
tactccatgtcctattcccagcaaagcacgcctgggatgaccgccctgggctccatgggg
ccctcttcggtggtgaagtccgagtccagcagctccagccctcccgtcgtcacttcgtcg
tcccaccgggccggcccgggctgccaaagcggggatctgagggacatgatcagcatgtac
ctgcccggggcggatgtcagcgagcagaacgcccagaccaggctacacatgtccggccac
taccagagcaccgtgcccgggacgacgatcaacggcacgctgcccttaacacacatgtaa
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