Notothenia coriiceps (black rockcod): 104941193
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Entry
104941193 CDS
T04920
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104941193
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104941193
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104941193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
104941193
NCBI-ProteinID:
XP_010764560
UniProt:
A0A6I9MT06
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MRGGSSYGDRDHGRDRPRFGAMSGRGGPPPMKFGNPGERLRKKKWNMDDLPKFEKNFYTE
HPEVQHLSQFEMEEFRRNKEITVRGSGCPKAIPAFHQAQFPQYVMDVLMQQHFKEPTAIQ
AQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQ
QVQQVALEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEIIIATPGRLIDFLESGKTNLTR
CTYLVLDEADRMLDMGFEPQIRKIVEQIRPNRQTLMWSATWPKDVRQLAEDFLREYVQIN
IGALELSANHNILQIVDVCMETEKDQKLLQLMEEIMAEKENKTIIFVETKKRCDELTRRM
RRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPVLLATDVASRGLDVEDIKFVINYDYPNS
SEDYVHRIGRTARSTNTGTAYTFFTQGNCRQARDLVRVLTEARQAVNPKLLQLVDSGRGG
NGGRMRYRGSSSYNSNSMYQGGYDRRTYGGSGGSKDGANGFSSGGRTNHDAPNHSSSSSS
SSYRDRSQGHRSSYNSGGSDQFQSYSGSGGYSSRSGGPPPGGQSSQLQGQFAQPPSAPPS
AGGPIPLMARPFAPLQLPLKGIMGQPPYPFAAPPAPPSGPPPPRK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggttcctcctacggagacagagaccatggacgagacaggccacggtttggg
gccatgagcggtcgcggtggacctccaccaatgaaatttggaaatccgggtgagcgtctc
cgcaagaagaagtggaacatggacgatctgccaaaatttgagaaaaacttctatactgaa
caccctgaggtccaacacctcagtcagtttgaaatggaagagtttcgcaggaacaaggag
attaccgtcagaggctctggatgcccaaaagcgatacccgcttttcaccaggcgcagttt
cctcagtatgtgatggatgtgctgatgcagcagcacttcaaagagcccacagcgatccag
gctcagggcttccctgtggccctcagtggcagggacatggtgggcatcgctcagactggc
tccggaaagactctggcttatcttcttcctgctattgtccacatcaaccaccagccttac
ctggagagaggagatggcccaatttgtcttgtccttgctccaaccagagagctggctcag
caggttcagcaggtcgcacttgaatacggcaagtcatcccgtatcaaaagcacctgtgtc
tatggtggagcacccaaaggaccacagattcgagacctcgagaggggtgttgagatcatt
atcgccacaccaggtcgtctcattgacttcttggagagcgggaaaactaacctgacgcgc
tgcacctacctcgtgctggatgaagccgaccgcatgctggacatgggcttcgagccacag
attcgcaagatagttgaacaaatcaggcctaacagacagactctgatgtggagtgcaacc
tggccaaaggacgtccggcagcttgcagaggacttcctgagggaatatgtccaaataaat
attggcgcactggagctcagtgccaaccacaacatcctgcagattgtcgacgtctgcatg
gagactgagaaggaccagaaacttcttcagctgatggaggagataatggctgaaaaagaa
aacaaaaccatcatctttgtggagactaagaagcgctgtgatgaactcaccaggaggatg
aggcgggatgggtggccagcaatgtgtatccatggagacaagagccagccagaaagagac
tgggtacttgcagaatttcgcagcggtaaagctccggtactgcttgctaccgacgtggcg
tctcgtggtctggatgtggaagatatcaagttcgtcatcaactatgactaccccaactcc
tctgaggattacgtccaccgtattggacgtacggcccgcagcaccaacacgggtacagct
tacaccttcttcacccaggggaactgtcgacaggcccgggacctggtccgggttctgact
gaggcccggcaggccgtcaaccccaaactgctccagctggtggattcagggcgtggtgga
aacggcggcagaatgcgttaccgtggcagcagctcctacaactccaacagcatgtaccag
gggggttatgatcgccggacatatggcggtagtggtggcagcaaagatggcgccaatggc
ttcagcagtggcggtcgcaccaaccatgatgcaccaaaccactcctcttcctcctcctct
tcctcctacagggacagaagccaggggcacaggagtagctacaactctggtggctccgat
cagttccagagctacagcggcagcgggggctacagctcccgcagcggaggcccgccccct
ggaggtcagagcagccagctgcagggtcagtttgcccagcctccttctgctcctccatca
gcgggggggccaattcctctgatggctcggcccttcgctcctctacagctaccgcttaag
ggcatcatggggcagcctccttacccttttgctgctccacccgctcctccttcaggccct
ccacctccccgaaagtag
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