Notothenia coriiceps (black rockcod): 104941295
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Entry
104941295 CDS
T04920
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104941295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104941295
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104941295
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
HECT type E3
104941295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
104941295
NCBI-ProteinID:
XP_010764677
UniProt:
A0A6I9MJL6
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MFSWGEHGCQLGDGSNISTADGVPFLNRVHITDLSLGRTVLAFIQGGGEASVIRTEESED
GRRVRGEQKFVKFKDKIKAVSCGDDTVTLLSERGQVLFLDTSLVPRPLSALCNIEVSQVA
CGSQHSVTLSKDGQVYTWGQGSGGQLGLGERQPSATSPQHLNSLSAVPLVQVAAGGGQSF
ALSVSGALFSWGSNHCGQLGLGDTTDRHTPTPVHNLNTKKTIHISCGKDHTATLTKDGAV
FTFGSGEHGQLGHNSLRDELRPRLVAELWGAKVTKIACGRHHTLVLTDSKRVYSFGCGEQ
GQLGHGEESPPSVPLPVQLPQDITDGPKIRNIFAGGNCSFATSVQEAQEESNTDSNLKQD
SIDDLIDKWLSKGNSRSWKRRQQNVRRTFSSASRVNQIFVDQSQDKHFRTSPKYHGLNFP
LVQRAFEKLAKRDGLLEKVEEAALHLLPSLDEEPVGWEGLRIFLILNELLHVIQKYKLQS
STKLSDAVATATQSLSAESRRVIGDWWSSLPSSTMSKHVKVWKQALSLILSNQPVPRNSG
VRNLLLVLQLIYNANSRIAGRKRLPEKTFCVGFCENFLQEDVQLWRSMSKIKDTDYQPLI
ICNFPFVMDLKSKKSAFDIDVKNEQQTAWHYGLPQTNPYFELKLKRKSLLEDTFGQLAAA
RPSDLKKTLMVYFDGDPKITLVSNRDLFHHSFRSMVSNKFEMFMFNTPETLAWFRSTATD
EDKTNCLLFGVLCGLALYNHCIIHLQFPLALFKKLLGVEPTLEDMMEFSPSVGKSLQYIL
DSEDDEVEDLYAEFLINWDQKEVDLDPQNPEKPVTAKNRNEFVDAYVNHAFNTSVEGVFQ
EFKRGFFMVCDQDLVKLFRPEELQRVLVGQEVYDWAKLKQNTVCDLRLGYDTIQMFWEVF
EELTEDQKKDFLWFLTGFRGVPIFGMDEVKMEIQLIQIQSGQTYDQHFPGSLTCHSILTL
PIYSSKEIMRDRLTEALLTVKGFSE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagagcacggctgccagctgggagatggttctaacatctcaacagct
gatggagtccccttcctgaacagagtccacatcacggatctgtcattgggtcgcactgtg
ctcgccttcatccaggggggtggagaggcttccgttatccgcacagaggagagcgaagat
gggagaagagtcagaggagaacagaagtttgtgaagtttaaagacaagataaaggctgtg
agttgtggagatgatacggtcacactgctgtccgagagaggacaagttctctttctggac
acaagtctcgttccaaggcctttgtcagctttgtgtaacatagaggtttctcaggttgct
tgtgggagccagcattcagtaaccttgtcgaaagatggtcaggtgtatacatggggccaa
ggctccgggggccagctgggtctgggggagaggcagcccagcgcaacatccccccaacac
ctgaactctctgtcagcggtccccctggtgcaggtcgctgcagggggggggcagagcttc
gccctctctgtctctggagcgctgttcagctggggcagcaaccactgtgggcagctcggc
ctgggagacactacagacagacatacaccaactcctgttcacaacctaaacacaaagaaa
actattcacatctcctgtggaaaggaccacactgctactttaactaaggacggtgcagtg
tttacgtttggctctggtgaacatggacagctcggacacaactcattaagagatgaacta
cgacctcggcttgttgcagagctctggggggcaaaggtcaccaagatagcctgtggaaga
catcacacattggtgttgacggactccaagagggtctactcctttgggtgtggagagcag
gggcagctgggacacggagaggagagtcctccgtctgtgccgctacctgttcaactgcca
caggatatcactgatggtcctaaaataagaaacatcttcgcgggaggaaactgttcgttt
gcaacttctgttcaggaagctcaagaggagtcaaacactgacagcaatttaaaacaggac
tctattgatgacctgattgacaaatggctctctaaaggcaattcaagatcatggaaaagg
agacaacagaatgtccgaaggacgttttcctctgcatcacgtgtgaatcaaatcttcgtg
gaccaaagccaagataaacatttccggacttctcctaagtaccacgggttgaacttcccg
cttgtgcaacgtgctttcgagaaactggcaaagagggatggtcttttggaaaaggttgag
gaagctgccttgcacttgcttccttcccttgatgaggagccagtgggatgggaggggctg
aggatcttcctgattctcaatgagctcctgcatgtgatccagaaatacaaactgcagtcg
agcacaaagctctccgacgcggtggctactgccacacaaagtctttctgctgaaagccgt
cgggtcataggggactggtggtcctcactgccatcctccaccatgagtaaacatgttaag
gtgtggaagcaggccctctcattgatcctgtccaaccagcctgttcctcgaaactcagga
gtcagaaacctgctcctagtcctccagctgatatacaacgccaacagcagaatcgcagga
cgtaagagactcccagaaaaaacgttctgtgtggggttttgcgaaaactttcttcaagaa
gatgttcagctttggcggtcaatgtcaaaaatcaaggatacggattatcagccacttatc
atctgcaacttcccatttgtgatggatctgaaatcaaagaaaagtgcttttgacattgat
gttaagaatgaacaacagacggcttggcattatggattgcctcagacaaatccctatttt
gaactgaagctgaagcgaaagtcacttttggaagacaccttcggacaactggctgctgca
cgtcccagtgatttgaagaagacacttatggtctatttcgatggggacccaaagatcaca
cttgtgtccaacagagacctttttcaccactcatttcgtagtatggtgtcaaacaaattc
gagatgttcatgttcaacaccccggaaacactggcgtggttccgctccacggcaacagat
gaggacaagacaaactgcttgctgtttggggttctgtgtggattggccttgtacaaccat
tgtatcattcacttacaattcccactggctctgttcaagaagctgctgggtgtagagccc
acactggaggatatgatggaattcagcccgagtgttggaaagagtctgcagtacatctta
gactctgaagatgatgaagttgaagacctgtatgcagagtttttgatcaactgggatcag
aaagaggttgaccttgatccccaaaatcctgaaaagccagtgacagctaaaaataggaac
gagtttgtggatgcctacgtgaatcatgccttcaacacatcagtggaaggtgtgtttcag
gagttcaagcggggcttcttcatggtgtgtgaccaggatttggtgaagctgttccggcca
gaagagctgcagcgagtgctcgtgggccaggaggtctatgactgggcaaaactgaaacag
aacacagtttgtgatctacgactaggctacgacaccattcagatgttttgggaagtgttt
gaggaactgacagaagaccagaagaaagatttcctgtggttcctgactggttttaggggt
gttcccatttttggcatggacgaggtcaagatggagattcaactcattcaaatccagagc
ggtcagacctacgatcagcacttccctgggtctctgacctgtcactctattctgaccctg
cccatatactcttccaaggagatcatgagagacaggctgacggaggccctgctgacggtg
aaaggattctctgagtga
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