Notothenia coriiceps (black rockcod): 104941485
Help
Entry
104941485 CDS
T04920
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104941485 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ncc04050
]
104941485 (edar)
Cytokine receptors [BR:
ncc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
104941485 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
DUF2852
Motif
Other DBs
NCBI-GeneID:
104941485
NCBI-ProteinID:
XP_010764886
UniProt:
A0A6I9MSX2
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MSERRSQKKSIFLSSLLVCCMFASAEYSSCGEYEFFNQTSNSCQACPQCQAGQEPHMSCG
YGVKDEDFACVPCPHGKYSKGKYEICRRHKDCDALYKATVKAAGTPDSDAECGPCLTGFF
MLETRPRNLYAMVCHSCQNAPRNTKECMSTSVKKEKTTIDPGSTTLFPHLPEDSTGQSHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKTVEGQTNKQEDKKDVPD
NVVIYSEKDEFDKLKAAPQKTVKSENDASSENEQLLSRSIDSDEEAASDKQGSAETNTPN
PCLVNLGNKPDLCLLSLGLLDRERACNGAPAYANGQANNTQSPNNTQSPNHIGKVNHIAS
ANHISTMNALNNNNKTPGMLQSRRKKILDLYGRACNVTEGLSPTELPFDCLEKASRMLSS
SYSSEAAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLD
AVESLCSDVLGSGEMAAAAGRQGNSTFHSQLVCTTPCPSPSQRCASI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcgaagaagtcagaagaaatccatctttctgtcctcattattggtgtgttgt
atgtttgccagtgcggagtattccagctgtggagagtatgagttcttcaatcagaccagt
aacagctgccaggcctgccctcagtgccaggcaggacaggagccgcatatgagttgtggc
tacggtgtgaaggatgaggactttgcctgtgtgccgtgcccgcatgggaaatattccaaa
gggaagtatgagatctgcagacgccataaggactgtgacgctctctacaaagccactgtg
aaagccgcgggaactccagacagcgatgccgagtgtggaccctgtttgactgggtttttc
atgctggagaccagacccagaaacctctatgcgatggtttgccactcctgccagaacgca
ccacgcaacaccaaagaatgcatgtcaaccagcgtgaaaaaggaaaaaactacaattgac
cctggcagcactactttgttccctcaccttccagaagattccaccggacaaagtcaccta
gcaacagctctcattatcgccatgtcaactattttcatcatggccatcgccatcgtcctc
atcatcatgttttacatcctgaaggccaaaccaagtggccaggcatgctgctcagggcaa
gttgtgaagacagtggaaggtcagaccaacaaacaggaagacaagaaagatgtccccgac
aatgtggtgatctactcagagaaagatgagtttgacaaactgaaggctgctcctcagaag
acagtaaaaagtgaaaatgatgcatcatccgagaacgagcagctgttgagtcgtagcatt
gacagcgacgaggaggcggcgtctgacaagcaaggctcagccgagaccaacacccccaac
ccctgcctcgtcaacctgggcaacaagcccgacctctgcctgctctctctgggcctcctg
gatcgggagcgagcctgcaacggggccccagcctacgccaacggacaggccaataacacc
cagagtcccaataacacccagagtcccaaccacatcggcaaagtcaaccacattgccagc
gccaaccacatcagcactatgaatgcactgaacaacaacaataaaacaccagggatgcta
cagagtcgaaggaaaaagatcttggatctgtatggcagagcctgcaatgtgacagagggc
ttgagccccacagagcttcctttcgactgtctggagaaggccagccgcatgctgagctcg
tcttacagcagcgaggcggccgtggtgaagacgtggaggcacctggccgagagcttcggg
ctgaagcgcgacgagatcggtggcatgagcgacggcctgcagctcttcgagagagtgagc
acggcgggctacagcatccccgacctcctgacccgcctggtccagatcgagaggctggac
gccgtggagtcgctctgctcggacgtgctgggcagcggggagatggcggcggctgcaggt
cgccagggcaacagcacttttcacagccagttggtctgtacaaccccatgcccgtctcca
tcccagcgctgcgccagcatctaa
DBGET
integrated database retrieval system
