Notothenia coriiceps (black rockcod): 104941504
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Entry
104941504 CDS
T04920
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc01100
Metabolic pathways
Module
ncc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104941504
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104941504
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
104941504
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
104941504
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
O-Glycan
104941504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
104941504
NCBI-ProteinID:
XP_010764910
UniProt:
A0A6I9MTY9
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MQQLFYENYEPNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIADLRHRTI
QLHREIVQMGRYGANEPGREDLQLGMPPSFMRFHPRQREEVLEWEFLTGKYLFSSSDGQP
PRRGMDSSQRQALDDIIMQVMEMINANAKTRGRVIDFKEIQYGYRRVNPLYGAEYVLDLL
LLYKKHKGKTMTVPVRRHAYLQQTFSQIQFKEEGEMDARALASHINKDSDSLSFLSNSLK
MLVPFKLATSGQDQKEPKEKKVNILVPLSGRYDIFVRFMANFERVCLIPNQNVKLLILLF
STDNNTEQVKQVELMREYHMKYPRAEMEIKPVTGSFSRALALEVGSLHFSNDSLLFYCDV
DLLFTSDFLKRCRTNTAPGEQTYFPIIFSQYDPKVVYAGKVPSNNHYVFTSKTGLWRNYG
FGIVCVYKGDLVRAGGFDTSIQGWGLEDVDLFNKFVQSGLKLFRSTDTGIVHVHHPVICD
PNLEAKQYKMCLGSKASSHGSSQQLAELWLEKNEHGFRRAASNNGSARTA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctcttctatgagaactatgaaccaaataagaagggctacatacgagatctc
cacaacagcaagatccatcgagccatcactctccaccccaacaaaaaccctccttaccag
tatcgcctacacagctacatgctgagccggaagatcgcagacctgcgccaccgcaccatc
cagctccaccgggagatcgttcagatgggccgctatggagccaatgagcccggccgagaa
gacctccagctgggcatgccaccttcatttatgcgcttccacccacggcagagagaggaa
gtgctggagtgggagttcctgacggggaagtatctcttctcatcatctgatgggcagcca
ccccgcagaggcatggattcctcccagaggcaagccctggacgacatcatcatgcaagtg
atggagatgatcaacgccaatgccaagacacgggggcgggtcattgacttcaaagaaatc
cagtatggctaccgcagagtgaatcctttatacggggcagagtatgtgctggatctgttg
ctgctgtacaagaagcacaaaggaaagaccatgactgtgcctgtgaggaggcacgcctac
ctgcagcagaccttcagccagatccagttcaaagaggaaggggaaatggatgccagagct
ctggccagccacatcaacaaagattcagactcgctctcattcctgtccaactccctgaaa
atgctggtgcccttcaaattggccacctctggccaagaccagaaggaacctaaagagaag
aaggtcaacatcttagtgcctctgtcgggacgctacgacatctttgtgcgattcatggcc
aactttgaacgagtttgtcttatccccaaccagaacgtgaagctgctcatcctgctgttc
agcacagacaacaacacagagcaggtgaagcaggtggagctgatgagagagtatcacatg
aagtatccccgagctgagatggagataaagcccgtcactggctccttctccagggctttg
gctctggaagtgggttctctgcacttctccaacgattctcttctcttctactgtgatgtg
gatcttctcttcaccagtgacttcctcaagcgctgtcggacaaacacagccccaggagag
caaacttacttccccatcatcttcagccagtacgaccccaaggtggtttatgctgggaaa
gtccctagcaacaaccattacgtatttacctccaagacaggtctgtggaggaactacggc
tttgggattgtctgtgtttacaaaggagacctggtccgagctggaggctttgacacgtct
atacagggctggggtttggaggacgtggaccttttcaataaatttgtccagtccgggctg
aagttgttccgaagcacagacacagggatagtgcacgttcaccaccctgtcatatgtgac
cctaacctggaggcaaagcaatataagatgtgcctgggctccaaagcctcgtcgcacggc
tccagccagcagctggccgagctgtggctggagaagaacgagcatggcttcaggagagcg
gccagcaataacggctcagcgaggacagcgtga
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