Notothenia coriiceps (black rockcod): 104941537
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Entry
104941537 CDS
T04920
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104941537 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104941537 (dcp1b)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104941537 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
104941537 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
C19orf12
Motif
Other DBs
NCBI-GeneID:
104941537
NCBI-ProteinID:
XP_010764940
UniProt:
A0A6I9MU06
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MTATSAGSSGCLTAKGLDISLAALQRQDPYINDIVDVASQVALYTYNNRANEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQRMKILTQQEQTLAQSQGGWLSPGGRGGVIGGGVLGGVLGGVLGGVVGEVRVG
GSETKSVDIIQMLTKARTEYDKSSSEPKEIGGSNVIYGNPNLIKPIPVKPIIQDGDSAAP
KPLSLATLFGSQKQHSPKPEPVSPLASPGTRPSTGKFTRPPVARSLKYDDSVNKSVPNQG
VNVAMVACSDGALRAVIGEHGGNVVGLLPNPTGAQQQQQHCPAIQKLMQGQRGVGVVGGV
LQTLSESPENRLCDNGVPLDHHHHHHHMYHHLHQQQHLHHQQQQQQQLQQQLQADPIKRL
FQTQQPLPFSLPPLQQIPHLPPQPGMGGPVSCSHLQAQPSQQLFYSQAAPTVQAAGLLPS
QVSNDQVLHPLQGLSSQMAGVVSPHELLQKLQLVQQEQASHEPPRPSPGLAPRFLGPTQG
PGAGPVVGQNQAPATAGQKAALQFQVISPQRIPATVAPNLLLSPSMFTQAKSSGGLSAGS
QENCPAPPSVCRAPPLQQEGRVLSRSQLQATMMHLIQSDGSFLDSIYEAYISRFANDSSS
KY
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttcagcagggagcagtggctgcctcaccgctaaaggactggacatcagt
ctggcagctctgcagcggcaagacccgtacatcaatgacattgtggacgtggccagccaa
gttgccctgtatacttataacaacagggcaaatgagtgggagaagaccgaggttgaaggc
accctatttatctacacaagactggcgtctcccaggcatggtttcaccattatgaacaga
ctgagtatggagaacttgacagagcctatcaccaaagacctggacttccagctgcagcac
cccttcctgctttaccgcaatgcacgattggttatccatggcatttggttctatgataag
gaggactgtcaacgcattgctcagaggatgaagattctgacccagcaggagcagaccctg
gctcagtctcagggtggatggttgtctccaggcggaagaggaggagtcattggaggaggg
gtactaggaggggtactaggaggagttctgggaggagtagttggagaagtgagagtggga
ggaagtgaaacaaagtccgtggacatcatccagatgttgaccaaagcacgcacagagtat
gacaagtcctcgtcagagccaaaggagattggtggcagcaatgttatttatggaaacccc
aacctgatcaaacccatacctgttaaacccatcattcaggacggtgacagtgctgcaccc
aagcctctctctctggccactctttttgggtctcagaagcaacactcacctaaacctgag
ccagtctcccctctggcctcgcccggaacaagaccatccacaggaaagttcacccgtcct
cctgtagcccggtcgctgaaatacgacgattcagtgaacaaaagtgtgcccaaccaggga
gtgaacgtcgccatggttgcgtgttcagatggagcgctcagggctgtgattggagaacat
gggggaaatgtggtgggattgttgccaaatcctaccggcgcccagcagcagcagcagcac
tgccccgccatccagaaactgatgcagggacagagaggagtcggggtggtggggggggtt
cttcagaccctctccgaatcccccgagaacaggctgtgtgacaacggggtgccgctggac
caccaccaccaccatcaccacatgtaccatcatcttcaccaacagcagcaccttcatcac
cagcaacagcagcaacagcagcttcagcagcagcttcaagcggaccccatcaagagactt
ttccaaacccagcaacctctccccttctccctccctcctctgcagcagatcccccatctc
ccccctcagccagggatggggggtcccgtgtcgtgttcccaccttcaagcacaaccaagc
cagcagctgttctacagccaggcagctccaactgtacaggcagcaggcttgctgccatct
caggtatccaatgaccaagtccttcatcctttacaaggtttgtcttcccagatggctgga
gtggtgtctcctcatgagctcctgcagaagctgcagctggtccagcaggagcaggcttcc
catgagccccctcgaccctccccaggactggcccctcgattcctggggcccactcaaggt
ccaggtgcaggccccgttgtaggccagaaccaggccccagccactgcgggtcagaaggct
gcgctgcagtttcaggtcatctccccccagcggattccagctactgtggcccccaacctg
ctcctctctcccagtatgttcactcaggcaaagtctagtggcgggttgtcagcggggtcc
caggagaactgcccggcccctccctctgtctgcagagcccccccgctgcagcaggagggc
agagtgctgtccaggagccagctgcaagccactatgatgcatctaatccagagtgacggc
tcattcctggactccatctatgaagcctacatcagccgctttgctaatgactccagcagc
aagtactga
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