Notothenia coriiceps (black rockcod): 104941774
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Entry
104941774 CDS
T04920
Name
(RefSeq) MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncc01001
]
104941774
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ncc04054
]
104941774
Enzymes [BR:
ncc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104941774
Protein kinases [BR:
ncc01001
]
Serine/threonine kinases: Other
TAF1 family
104941774
Pattern recognition receptors [BR:
ncc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104941774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
AAA_16
nSTAND_NTPase5
nSTAND3
AAA_22
LRR_8
NB-ARC
NPHP3_N
TsaE
AAA
PFF1_TM
Roc
Motif
Other DBs
NCBI-GeneID:
104941774
NCBI-ProteinID:
XP_010765213
UniProt:
A0A6I9MPM6
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
PRIQKCPDRDTPSRPKRQRAAARPKTKVVQAELSITQATGSEPSSAETAGLSTTPPRILH
LHPSIQFITIPDTPSCQVVRTLRLSPSVITLPITNTAATPTYIFVPAGSPQFKPQLPPLS
PTNGEVAPVQMSSSPRGSLSDTASKALTHPCASPLSPGNEPSTCKESPLPQCPTVLDIPQ
DVKDYIQEAKAHMSQACQVMEAGLSLTSHYVDVPVSQREILRSGKNINKALDKEIVIMGD
TDRQKSLLGRSQIFERSNGDKPKRFILLLGNAGMGKTTLIRRLCLDWSTDCIPQFDFVFL
LDSNALSLTDATFSLQTLLLNLSSFAPSCKDPNAVYAQILAAPKRVLVIFDGFCELRDYE
ILLQTQEKDLVTSLQKDSKAQTFTVKQLYSAILQRVLLPGCTLLLSTRTRGTASQLLRRT
DSLLEVCGFTPTDVQTYLSQYFTDPDLRVSALDCFKNCSYLHLLCWNPGLCRLVCLVLEQ
CKSLEVLPRTLTELCHQVLRMKVEKDSKDTNSQAETPSEISEKSVEETQTKSSSSSQMKR
RNKNTRTQRTRGSKKKETEKDNNDGEEMKSNGWEVVKTQERELLAQLSSLAWEGIKANSS
IVPKGRTISATVKAFGQRTGLLLSYNLGTRQVVSSCESEDRRKTGTRQTGEKRGSKGRTE
TESADASDDQILMWANPFLQSYLAGVHLSLSRTITDRAFLQTLPFQSGQKGRRRPQREEL
DLTQRFAVGLLFYNRRELQRFNSYTETTFRDMVASKQALVTTHLEGLSHDDLSPTQVLEA
CRYVYEASSSHGDGSRDSGSQRLVAHLAENLPEVLTFHGVPFKPSDVFAVQNVLDQGGAD
GRRFCLNLEDSGIQISGLRALLGLNNINTYRYMVPQRLSDSSSQSNSILAEGVPAVKELH
KLELELGPEKGPLVLPKLWELLPGLHNLQHLDLENSTIGDKGAEELADTLVSLGSLEILN
LSQNCIGDQGVRKLATVLRDLPKLHCLSLYSNVICDEGAETLAAVLPHMASLTDLDVKYN
KLTSVGAQSLGASLRNCRKIKTLRMWNQCIPYGVFERLQQQDNRIQWQ
NT seq
3209 nt
NT seq
+upstream
nt +downstream
nt
ctcctcggatacaaaagtgccccgatcgggacacaccatctaggccaaagagacaaagag
cagcagctcgaccaaaaactaaagtggtgcaggctgagctgtcaatcacccaagccacag
gatcagagccaagttcagcagagacagctggcctctccaccactccaccaagaatcctcc
atctccatccctccattcagtttatcaccatcccagacactccatcatgtcaggttgtcc
ggaccctgaggctctctccttcagtaatcacacttccaatcaccaacactgctgctacac
ctacttacatatttgttcctgctggatcgccgcaattcaaacctcaactgccacccctct
ccccgacgaatggtgaagtagctccagtccaaatgagttcatccccacgcggatctctgt
cagacactgcaagcaaagccttaactcatccttgtgcctcacccctctcacctggcaatg
agccgtctacgtgtaaggaatcccctcttcctcagtgccccacagtccttgatattccac
aggatgtgaaggactacatccaggaagccaaagcacacatgagtcaagcttgccaggtta
tggaggctggccttagcctgacgtctcattatgtggatgtgccagtgagccagagggaaa
ttcttcgctctggaaaaaacataaacaaagccctggacaaagagatagtcatcatgggag
atacagatcgacaaaaaagcttgttggggaggagtcagatctttgagagatcaaatggag
acaaaccaaaacgcttcattttgcttctaggcaatgctggcatgggaaaaaccaccctga
taagaagactgtgtctcgactggtccacagactgcatcccacagtttgactttgtcttct
tgttagacagcaacgcactctctttaacggacgctacctttagccttcagaccctcttac
taaacctctcctcctttgccccttcctgcaaggaccccaacgcagtgtacgctcaaatcc
ttgcagcccctaagcgcgtgcttgtcatttttgatgggttttgcgagttgcgggactatg
aaattcttctccagactcaagaaaaggacttagtaacgtcgttacagaaggacagtaaag
cacagaccttcacagtaaaacagttgtactctgccatccttcagagggtcctccttccag
gatgcacacttctgctttctacccgaacgagaggcacagccagccagcttctccgccgaa
cggacagcctgttggaggtgtgtggcttcacccccactgacgtacagacatatctgtccc
agtacttcactgaccctgacctcagagtatctgctttggattgcttcaaaaactgcagct
atctacatctcctgtgctggaaccctggactgtgtcgcttggtctgcttggttttagaac
agtgcaaaagtttggaggtcctaccgagaacgttaaccgagctctgccatcaagtgcttc
gtatgaaagtggaaaaagacagcaaggacacaaactcacaggctgaaactccatcggaaa
tatctgagaaatcagttgaagaaacccagacaaaaagctcaagtagttctcaaatgaaga
ggcgtaataaaaacactcgcacgcaaagaacaaggggttcaaaaaaaaaggaaacagaga
aagataacaacgacggagaggaaatgaagagtaatggctgggaagtagttaaaacccagg
agagggagttgctggcccagctaagttctctggcctgggaggggatcaaagcaaactctt
ccatcgtccccaaaggacggaccatatctgcaacagtcaaggcgttcggccaaagaacag
ggctcttactctcttataatctggggacgaggcaggttgtctcaagttgtgagagtgagg
acagaaggaaaactggaacaagacagactggtgaaaagaggggaagcaagggaaggacgg
aaactgaaagcgctgatgcaagtgatgaccaaatcctgatgtgggccaaccctttccttc
agagttaccttgcaggggtccatttgtctctgtcaaggacaataacagaccgtgccttcc
tccagaccctccctttccaatctggccagaagggtcgccggcggcctcaaagggaggagc
tcgatctcactcagcggtttgcggtcgggctgttgttctacaaccggagagagcttcaga
ggtttaactcatacacagagacaaccttcagagacatggtggcctctaagcaggctttag
tgacaacacaccttgaaggtctttcccatgatgacctgagccccacccaggtcctggagg
cttgtcgctatgtttatgaggcgagttcctcacatggtgatggtagcagagacagtggta
gtcaacgattggttgctcatctggcagagaatcttccagaggtcctgacatttcacggag
ttccttttaagccatcggacgtgtttgctgtgcagaacgttctcgaccagggtggagctg
acggtagaaggttttgtttgaatctggaggattctgggatacagatttcgggactcagag
ctctgttggggctcaacaacatcaacacatacagatacatggtgccacaaaggctgtcag
acagttccagccaatccaattcaatcctggcagagggggtaccggcagttaaagagctac
acaagctagagttggagcttggtccagagaaaggtcccctggttcttcccaagctatggg
agctcctgccaggtctacacaacctacagcacttagatctagagaacagtacgattgggg
acaaaggagcagaggaattggcggatactttagtctcacttgggtccctggagattctca
atttgtcacagaattgcataggagaccagggggtgaggaaactggccactgtgctgcggg
atcttcccaaactgcactgtttaagtctctacagtaatgtgatttgtgacgaaggtgcgg
agactctggctgctgtcctcccacacatggcttcgctcactgacctggatgtcaagtaca
ataagctaacaagtgttggagcacagagcctgggagccagtctgagaaactgtagaaaaa
taaagaccttgaggatgtggaaccagtgtattccttacggtgtgtttgagagacttcagc
agcaggacaacaggatccagtggcagtag
DBGET
integrated database retrieval system
