Notothenia coriiceps (black rockcod): 104941872
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Entry
104941872 CDS
T04920
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104941872 (ubr1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104941872 (ubr1)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
104941872 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104941872
NCBI-ProteinID:
XP_010765338
UniProt:
A0A6I9MQ05
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MAEGEKSLDGLELSKQWLEAADSRAELFRYLKEQVPQIFCLKKESTPQEEEELMQSQLLY
PLECFLFGEDPQEGLEKLKQGSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKTHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGADTAMVTDECGVEPELYERAER
LFRILLDYVTDFLVWEESHDLSAELQPRAKDNAYYCVLYNDEHHSYDHVIYTLQRSVNCD
QAEAQTHTALIDKEGRRAVKRGTLRSCQQAKDLIRSNSEHISQQPLRVEILHSAVMAHQT
FVLRLGPWFQKIIGYSVGFRQAFCLVALETNPDGDQPCLISKLMLHDGKMYKGARKIVHE
LIFCSMLMETEFKRLFAIEFTKHYKQLQRDFIVDDHERSISITALSVQIFTVPTLARQLI
EVGNVIKVIVGTVMDLLREHLDDNNRFFFLGYNSDKFSRIQVIFHDLRYILISKPSVWTE
ELRKEFMEGFKVFLGLLKCMQGMEEVKRQFGQHIAVEPEWEAGFSLQIQLRHILAMFQDW
CSSDEEILMVAFKECHSVLMQCNNQPFHREATDYYMCKHIIHVHPYKVSQEPVSIHLPVS
RLLAGLYVLMCRAGAVDRVDNLAGFDRTQLVEHPLRCVVLAAQVSAEMWRRNGLSLVSQV
YYYQDVKCRDEMYDKDILMLQIAASKMDPNHFLMLVLLRFELFDYFNGSCSSKDQDELIQ
WNRLTEEMLYLLIVITGERYVPGVSEVTKEDVTMREVIHLLCIEPMAHSSLVKGLPENES
HETGLESVITKVATFKKPGVSGHGLYGVKKELLVEFNPFFYHYSRSQHSKAEESQKKRRT
HEGNDKALRPPMPPPFCPAFSSVVRLLSCDIIIHVLRRVLQRAAEDRATHWTEAMIQRAL
HLIGQALLEEKSQLEESTDEEVTFDFSLKARRIGSEHGKSVFLLLSKIKAVPSLEAQKDM
VKWVLQMFEIVKCLREKSSPSASMSMDTSKPEESAQDKEKAERKRKAEAAKLHRQKIMAQ
MSTMQKNFIESNKMLYENMPESGTQGEPVTIPENCAMEHRELCVAVGPLRGCSPAEREVL
TCILCQEEQEVVAQAPAMVLTACVQRSTVLTQCRGKIPANRADGTGASYPLFMPPELAVG
THTGSCGHVMHATCWQKYFEAVQNMTRNRLHAELIIDLENGEYLCPLCKSLCNTVVPLIP
FETLTFNYENAEIIGQHLTLPRWIQILSARIKGLKSVAQDNECNTQASSVDADTGLCGEG
QPDFRSILSYGVQEPRKFSDSIVEMLVVCATTVHRVGLQTGPNELCPRVPVMAWNTCAFT
IQAIENILQEEGKPLFGSLQNRQLAGLKAIVQFSAAQRLKSSQAVIQRHFNDMLGVLLPV
IGRKNTPSILEVDFFHLLVGLVLSIPSLYQEEAVDLQPSAVSSAYNHLHILHMVTMAHML
QVLLSSTDFPAVAGEETEETRAAAELYAAASHHTDRLNPDVSGSSVAERVKRGMEPFLRC
AALFFNCLTGVNPPEELSSTAVTSQGQIEALCSYLALPSNVFQLFQEHRDPVTPLLQRWC
GNPAVTKALRGKIQSVRYPRRRNRLIDLPEDYSALLNQACHFQCPKSTDDDRKHPTLCLF
CGAMLCSQSSCCLSQLDGEDVGACTAHAATCGAGVGMFLRIRECEIVLMASKTRGSTYPA
PYLDDYGETDPHLGRGNPLHLCPERYRKLNQLWQQHCILEEIARSLEVVNVMFAFEWQML
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtgagaaatccctagacggactggagctcagcaagcaatggctggaggcc
gcagacagcagggcggagctgttccgctacctgaaggagcaggtgccacagatcttctgc
ctgaagaaggagtccacccctcaggaggaagaggagctcatgcagagccaactcctctac
cctctggagtgcttcctgtttggggaggatcctcaggagggtctggagaagctcaagcag
ggcagcacctcctcccaactctgcggacgtgtttttaaagagggagagactgtctactcc
tgcagggactgtgcaatagatcccacttgtgtcctgtgcatggactgcttccaggatagc
gttcacaaaacccatcgttacaagatgcacgcatcatcaggagggggcttctgtgattgt
ggggatgtagaagcctggaagattggcccctgttgctccaaacacgacccaggagcagac
actgccatggtaacggatgagtgtggagtggagcctgagttatacgagcgtgctgagagg
ctgtttcggatacttctggactacgtcacagatttcttagtgtgggaggagagccacgac
ctctcagccgagctccagccccgggcaaaagacaatgcatactactgtgtcctgtacaat
gatgagcaccactcgtacgaccatgtgatctacaccctgcagcgctctgttaactgtgat
caggctgaagcgcagacacacacagcacttattgacaaggagggtcgacgggcagtaaag
agaggaacccttcgttcctgccaacaagcaaaagatctcatcaggtccaactcggagcac
atttcccagcagccactacgtgtagagatccttcactcagcagttatggctcatcaaact
tttgttctgcgcctcggcccctggttccaaaagatcatcggttactcagtgggcttcagg
caggctttctgtctggtggcactagaaaccaatccagacggggaccagccttgcctcatc
agcaaactcatgctgcacgacggcaagatgtacaaaggtgcacgcaagatcgtccatgaa
ctgattttctgtagcatgctaatggagactgagttcaagaggctttttgcaattgaattc
acaaagcactacaagcagctgcaaagggactttatagtggatgaccatgagaggagcata
tccatcactgctttgtctgttcaaatattcactgtacccacactggccagacagctcatc
gaagtgggcaatgtcattaaagtgatagttggtacagtcatggatttgctgcgtgaacat
ctggatgacaacaatcgcttcttcttcctcggctacaactctgacaaattctcacgcatt
caggtcatcttccacgacctcaggtacatcctgatcagtaaaccctcagtatggactgaa
gagctgcggaaagagttcatggagggattcaaagtctttcttgggcttctcaaatgcatg
cagggtatggaggaggtgaagcgccagtttggtcaacacattgcggtagagccggaatgg
gaggctggcttttctcttcagatccagcttcgccacattcttgctatgtttcaggactgg
tgttcctctgatgaggagatattgatggttgcattcaaagagtgccacagtgtcctgatg
cagtgcaataaccagcccttccatagagaggccaccgactactacatgtgcaaacacatc
atccatgttcatccatacaaagtgtcccaagagcctgtcagcatacacctgcccgtctcc
aggctactagctggtctgtatgtgctaatgtgcagagcaggggcagttgatcgtgtggat
aatcttgcgggcttcgaccgcacccagctggtggagcatcctctgcgctgtgtggtgctg
gctgctcaggtctctgctgaaatgtggcggagaaacgggctctcattggtcagccaggtc
tactactatcaggatgtaaaatgcagggacgagatgtacgataaggacattctcatgctc
cagattgctgcttccaaaatggaccccaaccacttcctcatgctggtcttgttgagattc
gagctctttgattatttcaatggaagttgttcgagcaaagaccaggatgagctgatacag
tggaaccgcctgacagaggagatgctgtacctccttatcgtcatcacaggtgagcgatac
gtccccggtgtcagtgaggtgaccaaagaggacgtgacgatgagggaggttatccacctg
ctgtgcattgagcccatggctcacagtagcctggtcaaaggtctgccagagaacgagagc
cacgaaaccggcctggagtctgtaattaccaaagttgccaccttcaaaaaacccggagtt
tcagggcatggattgtatggagtaaaaaaagagcttctggtagaattcaatcctttcttc
taccactactcaagatcacagcatagcaaggctgaagagtctcagaagaagaggaggact
cacgagggcaatgacaaagctctgcgtcctccgatgcccccccccttctgcccagctttc
tccagcgtagtgcgtctgctcagctgcgacattatcatccacgtcctgaggcgtgtcctg
cagagagctgcagaggaccgagccacccattggacagaagccatgatccagagggccctg
cacttgataggccaggcattgcttgaagagaaatcacagcttgaagagagcactgatgag
gaggtgacttttgatttcagcctcaaggcccgcagaatcggttcagaacatgggaagtca
gtgtttctcttgctgtccaagatcaaggctgttccttccctcgaagcccaaaaagacatg
gtcaaatgggttctacagatgtttgagattgtgaagtgccttagagagaagtccagtcca
tctgcctccatgagcatggataccagcaagccagaggagagtgctcaggacaaagagaaa
gctgaacgcaaaagaaaggccgaagcagccaaactccaccggcagaagattatggctcag
atgtcaacgatgcagaaaaacttcatagagtcaaacaagatgctgtatgaaaacatgcca
gagagcgggacacagggagagcctgtgacaattcctgagaactgcgccatggagcacagg
gagctgtgtgtcgccgtggggcccctacgaggctgctccccggccgagagggaggtgctc
acctgcatcctgtgccaggaggaacaggaagtggtggcccaggctccagccatggtgctg
actgcgtgtgtccagaggtccacagtgctgacacagtgcagaggaaagataccggccaac
agggcagatgggacaggggcatcatatcccctcttcatgcctcctgaactggcagttggg
acccacacgggcagctgtggacatgtcatgcatgccacatgttggcagaaatattttgag
gcagttcagaacatgaccaggaaccggcttcacgctgagctgatcatcgacctggagaac
ggggagtacttgtgtcccctgtgcaaatctctgtgcaacactgtggtccctctcatcccg
tttgaaacgctaacatttaactatgaaaatgctgagataattggacagcatttgaccctg
cctcgctggatccagatcctctctgctaggattaaaggactcaagtctgttgctcaggat
aatgagtgcaacacacaggccagcagtgttgatgcggacacggggctgtgtggggagggc
cagccagacttcagatccattctgagctacggagtacaagaaccgaggaagttctccgac
agcatagtggagatgctggttgtctgcgccaccacggttcacagggtgggtctgcagacg
ggacccaatgagctgtgcccacgtgtgcccgttatggcttggaacacatgtgccttcact
atacaggccatagaaaacatattgcaggaagagggcaagccactctttgggtccttgcag
aacagacagcttgcaggtctgaaggcgattgttcagttttcagcagctcagagactaaag
agctcccaggctgtcattcaaaggcacttcaacgacatgttgggggtcttgctaccggtc
ataggcagaaagaacacgccttctatcctggaggtcgacttcttccatcttctggtgggc
ttggtgttgtctataccctcactgtatcaggaggaggctgtagacctacagccgtcagcc
gtcagctccgcctacaaccacctgcacatcctgcacatggtcaccatggctcacatgctg
caggtcctcctgtcctccacagatttccctgcagtagctggagaggaaacagaggagacg
agggcagcagcagagctgtacgctgcagcgtcacaccacaccgacaggctgaatccagat
gtgtccggcagctctgtggcagaaagagtaaagagaggaatggaacctttcctgcgctgt
gctgctctctttttcaattgccttacaggagtcaatcctccagaggagctttctagtact
gcagttacctctcaaggacagattgaggcactatgcagctacttggcacttccctccaat
gttttccagctcttccaggagcacagagaccccgttactccactgctgcagaggtggtgc
gggaacccagctgttaccaaagccctgagaggcaaaatccagagcgtcagataccccaga
agaaggaatcgtctgattgatcttcctgaggattacagtgctctcctcaatcaagcatgc
cattttcagtgccccaagtccacagacgatgacaggaagcacccgaccctgtgcctgttc
tgtggggccatgctgtgctctcagagctcctgctgcctcagccagctggatggagaggat
gtgggggcctgcaccgcccacgctgctacctgtggagccggagtgggcatgttcctcagg
ataagagagtgtgaaattgtactgatggccagtaagactcgaggaagcacttaccccgct
ccttacctggatgattatggggagactgatcctcaccttggaaggggcaatccactgcac
ctttgcccagagcgctacaggaagctgaaccagctgtggcagcagcactgcatcctggaa
gaaatcgcccgcagcctggaggtggtcaacgttatgtttgcctttgagtggcagatgttg
tga
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integrated database retrieval system
