Notothenia coriiceps (black rockcod): 104941952
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Entry
104941952 CDS
T04920
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104941952 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104941952 (rapgef2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
RA_2
cNMP_binding
P33MONOX
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104941952
NCBI-ProteinID:
XP_010765423
UniProt:
A0A6I9MQ90
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MIVVDYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYHTL
PADFSRLHLADGLHPQVTRVSSSHSGCSITSDSGSSSLSDIYQATENEQGDMDLSGLPET
AVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTM
SVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRTEILCMGNSFGV
SPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELD
RTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGRKLLEWFH
DPSLRDKVTRVVLLWVNNHFNDFEGDLAMTQFLEEFENNLEKEKMCGHLRLLNIACAAKA
KPRLVTLTKPSRDSPLAFTLLGGQEKGFRVFIDAVEPGSKAAEVGLKRGDQILEVNGQNF
ENVQLNKANEILKNNTHLSITVKTNLLVFKDLLTRPEHDHDLDGEEEHERKNGAPHLPKI
GDIKKASRYSIPDLAVDVEQVMGLEKVSKKAKSNSVGGRNKLKKIFDKTLTSILPPKPYN
DVCVGQSQDDSIVGMKQSKQIALPALPVSGNLSSSNPDLLQSHHRILDFNNQPDMSDQVL
RVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPD
QLSKLADRIQLSGSGLNLAPVSRLRGTWEKLPSKYEKLFSDLQDLFDPSRNMAKYRNVLN
NQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMASVNMDPA
LMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMARKVK
QYLSNLSLETNEESLQTLSMQCEPSISTLPKNAGGKRPDTSPVVCRAASQQRGQLAKGGQ
ALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEGNERHRRQPEDTVSNASSQ
LSSPPTSPQSSPKKGYNAYSDSGHSEISSRSSLVSNSSFDMTQDERRLRHSGVGESNIVG
QRLERRATTDSDQYSLGSYSSMQDCRGIYSGCPTVLSSPSSEELTQDQGDRVSLDAADSG
RGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGGLPPGGPEALLGGHAALWAAQARGS
WASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADAETSSITSTGSEEAKHLGRPSPSP
ITTGGKGLLTRKESRYREPPPTPPGYTALTISDLADGQHPPPAVPASTAPHTGRRPPDYS
TALQRSRMVTQSPDSHQAQQGAKQRAGGLHRTRSPAEEQEAQEEEEEDEQVSAV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggtggactatatggatgaaaatgaggagtactttcagcgacaagcctcgcac
agacagtcccgtcggcgcttccggaagatcaaccagaaaggggagcggcagacgatcatc
gacaccgtggatccgtatcccaccggaaagccgcccatagcccgggggtatcacacgctc
cccgcagacttcagcagacttcacctggccgacggcttgcacccacaggtgacccgcgtg
tcctccagccactcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagac
atttatcaggccacagaaaacgagcaaggcgacatggacctcagcggcctgccggagacc
gctgtggactccgaggaagacgacgatgaggaggacatcgagcgagcgtcggaccccctc
atgagcagggacatcgtgcgggactgtctggagaaagaccccatggacagaactgacgat
gacatagagcaattactggagttcatgcatcagctgccagcgttcgccaacatgacgatg
tcagtgaggagggagctgtgcgccgtcatggtgtttgctgtggtggagcgcgccggcacc
atcgttctcaatgacggagaggagctggactcgtggtcggtgatcctgaacggctcggtg
gaggtgacgtaccccgagggccgcacagagatcctgtgcatggggaacagcttcggggtg
tcacccaccatggagaaggagtacatgaagggcgtgatgaagaccaaggtggacgactgc
cagtttgtgtgcatagcccagcaggactactgctgcatcctcaaccaggtggagaagaac
atgcagaaggtggaggaggaaggggagatcgtcatggtgaaggagcaccgcgagctggac
cgaaccggcaccaggaaaggacacatcgtcatcaagggcacatcggagcgtctcaccatg
cacctggtggaggaacactcagtagtggaccccacctacatcgaggacttcctgttgacc
tacaggaccttcctctccagccccatggtcgtgggcaggaagctcctggagtggttccac
gaccccagcctcagggacaaggttacacgggtagtcttgctgtgggtaaacaatcacttc
aatgactttgagggtgaccttgccatgactcaatttctggaagagtttgaaaacaatctg
gagaaagaaaaaatgtgtgggcacctcagactgttaaacatagcgtgtgctgctaaagcc
aagccgcggctggtgacgctgaccaagccgtccagggactctccgctggccttcaccctc
ctcggaggtcaggagaaagggttccgcgtcttcatcgatgccgtggagcccgggagcaag
gcagcagaagttggccttaagcgtggagatcagatcttggaggtgaacgggcagaacttc
gagaacgtgcagctcaacaaagccaacgagattctgaagaacaacacccacttgtccata
actgtgaaaacaaaccttttagtttttaaagatctgctcaccaggccagaacacgaccat
gatctggacggtgaggaggaacacgagagaaagaacggagcgccccacctcccgaagatc
ggagacatcaagaaggcgagccgctactccatccccgacctggcggtggacgtggagcag
gtgatgggcctggagaaggtcagcaagaaggccaagtccaactctgtgggaggacgcaac
aagctgaagaagatcttcgacaaaacactcaccagcatcctgccgcctaaaccatacaat
gacgtttgcgttggccaatcgcaggacgacagtatcgtggggatgaagcagtccaaacag
atcgcactgccagctctgcccgtcagcggaaacctctcgtcgtcaaaccccgacctgctg
cagtcccaccaccgcatcctcgacttcaacaaccagcctgatatgtcggaccaggtgttg
cgagtcttcaaggcggaccagcagtcccggtacatcatgatcgggaaggacaccacggcg
aaggaggtggtggctcaggccatcagggagtttgctctgacagcagcccctgaagcgtac
tcgctgtgtgaagtgtccgtcactccggagggcgtcatcaaacagaggaggctacctgac
cagctctccaaactggccgacaggattcaactgagcggcagtggtctgaacctggctcca
gtctccaggctgagaggaacgtgggagaagctgcccagtaagtacgagaagctgttcagc
gacctgcaggacctcttcgacccctccaggaacatggccaagtacaggaacgtgctgaac
aatcagaacctgcagccgccaatcatccccctgttccccgtcatcaagaaggacctcacc
ttcctgcacgaaggcaacgactccaaagtggacggcctggtgaactttgagaagctgagg
atgatcgccaaagaaattcgccatgtgggtcgcatggcctccgtcaacatggacccagcc
ctcatgttccgcacaaggaagaagaaatggaggagtttagggtctctaagccagggtagt
gccaatgcggcggtgctggacgtcacgcagaccggcgggcacaagaagagggtgagacgc
agctccttcctgaacgccaaaaagctttacgaggacgcgcagatggccaggaaggtcaaa
cagtatctgtccaacctcagcctggagaccaacgaggagagtctgcagacgctctccatg
cagtgcgagccctccatcagcacactgcccaagaacgccggtgggaaacgaccagatact
tccccggtggtgtgccgagcggccagccaacagaggggccagctggccaaggggggccag
gccctgcaggtccccgccgtggccctctacccatcccggaagaaagtgccagtcaaggat
ctgccgccttttggcaccagctcccctcagtctctgaagaagatcctgtctctgtcggag
gaggggaacgaaaggcaccggaggcagccagaggacaccgtgtccaacgcctcctcccag
ctctcctcccctcccacctccccacaaagctcacccaagaagggttacaacgcctactcg
gactccggtcacagtgagatctcctctcgctccagcctcgtcagtaactcctccttcgac
atgacgcaggacgagaggaggctccgtcactctggagtcggggaatccaacatcgtggga
cagcggctggaacgaagggcgacaaccgactctgaccagtacagcctcgggtcatattca
tcgatgcaggactgtcggggcatttactccggctgccccacggtgctctcctcccccagc
tcagaggagctgacccaggatcagggcgatcgagtctccctggacgctgcagacagcggg
cgaggctcctggacgtcctgctcctcgggttcccacgacaacatccagaccatgcagcag
ggccgcagctgggagactctggccttcggtgggggcggaggaggggggctgcctcctgga
ggtccggaggccctgttaggggggcacgctgctctgtgggccgcccaggccaggggcagc
tgggcttcagctagctcctcctcctcctcagctgcgtactggggggaggactctgaggga
gacaccggcaccatcaagaggaggggggggaaggacgtgaacgccgacgcagagacgagc
agcatcacctccaccggctcagaggaggccaagcacctgggccggccctccccctcaccc
atcaccaccggggggaagggactgctgacacggaaagagagtcgttaccgcgagcccccc
ccgaccccccccggctacacggccctcaccatctctgacctggctgacgggcagcacccc
ccgccagctgtccccgcgtccacggctccgcacacaggccgccggcccccggactactcc
actgctctgcagcgctcgcgcatggtcacccagtcgcccgactcccaccaggcccagcag
ggggccaagcagcgggcggggggcctccaccgcacacgctcaccggccgaggagcaagag
gctcaggaggaagaggaggaggatgaacaggtgtcagcggtctaa
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