Notothenia coriiceps (black rockcod): 104941993
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Entry
104941993 CDS
T04920
Symbol
brwd1
Name
(RefSeq) bromodomain and WD repeat-containing protein 1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104941993 (brwd1)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104941993 (brwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
Beta-prop_EML_2
Pinin_SDK_N
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Bromodomain
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104941993
NCBI-ProteinID:
XP_010765479
UniProt:
A0A6I9MG66
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MAKHRNILLLESELYYLISRFLTTGPCRRAAEVLASELEEHQLLPGRLDWLGNEHPRTYE
DVVAANRHISPDHLLQICKQIGPILDKDVPSCVPGVHSLLGSGKQSMLRTAKDCDSVRFK
ASSYAALHRGRPPERPFNRKKPPHLVEIHRGRELTGVQRFSSINPVSNYERMRLHRRILG
HLSAVYCIAFDRTGLRIFTGSDDCLVKIWSSFDGRLHSTLRGHSAEITDLAVNYENTLIA
AGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFAKGSKRYMLSTGTDATVCFWQWD
VNNINFSDRPHKFTERPRPGVQTVCSSFSPGGMFLVTGSTDDVIRIYYLGGGSPDKISEL
HEHTDKVDSIQFCHSGERFVSGSRDGTARIWKLHLRQQWRSLLLNMAATLPGVEPMSEEE
SYFKPKVTMVAWDRHDNTVITAVNNHLLKVWNSYTGQLLHILKGHEAEVFVLEPHPLDPR
IILSAGHDGNVFIWDLLRGTSTQHYFNMIEGQGHGAVFDCKFTPDGHRFACTDSHGHLLI
FGFGSSKPYEKLPDQVFFHTDYRPLIRDTNGFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
KYQRLVPGRENISAEHLVPQLGYVATSDGEVVEQVISQQTSEHDEAAIRRSTLLDEAIRN
LQIQQDQQGQPGEGEAAPGAAAAPEGQAEAQGLFLVPAPSTPRRVSVNERADVQSPPNVG
LRRSGQVEGVRQMHQNAPRSQMATERDLQAWRRRVVVPEVAPSSYREQENFRTARGDEEM
SLYNAKKRRIIHSSCRDDSDEDEAARRAHAGLEFMDLSCEEGEETASSEEGELDGSEMDS
SNDEEEWKSDSSRLAGDQRARRDVRHDSDAEDDDDVKKPALQSSVVATSKERTRRDLIQD
QTIDERGKQRYHDMPDVIDFLVVRQTYDEALRRNWQPNDRFRSVIDDAWWFGMIVCQEPY
QSEYPDSLFQCFKVRWDNGETEKLSPWDVEPIQDDAPQPELEGGGIPVTEEEMRELMYKP
LPGEWGERSRDAECERIIAAIDQLITVEIAAPFSGPVDLIQYPTYCTEIAYPTDLGTIRL
RLLNRFYRRLSALVWDARYIAHNARTFNEPMSKIAHSAKIITNVLQKFVNNPSCTDIMEI
YNAVEEMDDEDE
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatcggaacattttgctccttgagtcggagctctattacctgatttctcgt
ttcctaacaacgggtccatgtcggagagcagctgaggtcctggcgagtgaactggaggaa
catcagctattacccggtagattggactggctgggaaacgagcacccgagaacatacgaa
gacgtggttgcagcaaacagacatatttcaccagaccatttgctacaaatatgcaagcag
atcggaccaattcttgacaaagatgtgccatcatgtgtcccaggagttcactccctcctg
gggtccgggaagcagtcaatgctcaggacggcaaaagactgcgacagtgtgcggttcaaa
gcttcatcatatgcagcccttcaccggggcagaccaccagagaggcctttcaaccgcaaa
aaacctccacacctcgtggagatccatcgaggcagagagctgacaggagtgcagcgcttc
agctccatcaaccccgtcagcaactatgagcgcatgcggctgcaccggcggatcctgggc
catctgtctgcagtgtactgtatcgccttcgatcgcaccggtctcaggatcttcacaggc
tcagacgactgtttggtgaagatttggtcttcgttcgatggaaggcttcattccacgctg
cgaggacactccgcagagatcacagacctggcggttaattatgagaacacgctcatcgcc
gcaggaagctgtgacaagaccatccgtgtgtggtgccttcgtacctgtgcccccgtggct
gtgctgcaggggcacagcggatccattacctccctacagttctcaccgtttgctaagggc
tcaaagcgctacatgctctccactggaactgatgctaccgtctgcttctggcagtgggac
gtcaacaacatcaactttagcgatcggccacacaagtttacagagcgtccgaggccagga
gtccagacggtgtgctcctcattcagcccgggtgggatgtttttagtaacaggaagtact
gacgatgtcatccgaatatactaccttggaggcgggagtccagataagatatccgaactg
cacgagcacacggacaaagttgatagcatccaattttgccactcaggggaaaggtttgtg
agtgggagtcgagatggaaccgcccggatctggaagctccacctgcggcagcagtggagg
agcctcctgctcaacatggccgccactctgccgggcgttgaaccaatgagtgaagaggag
agctacttcaaacccaaagtcaccatggtagcgtgggaccgccacgacaacacagtcatt
acggccgttaacaaccatctcctcaaagtgtggaactcctacacaggacagctgctacac
atccttaaaggccacgaggccgaggtgttcgtcctggagccgcacccgttagacccccgg
atcatcctgtctgccggccacgacgggaacgtcttcatatgggatctgctgcgaggaacc
agcacccagcactacttcaacatgattgagggccagggacatggggccgtttttgactgc
aagttcaccccagatggtcatcgcttcgcctgcacggactctcatggccatctgctcatc
tttggtttcggcagctccaagccgtatgaaaagcttccagaccaggtgttcttccacaca
gactaccggccgctgatccgggacaccaacggcttcgtgctggacgagcagacgcagcag
gccccccatctcatgcccccacccttcctggtggacgtggacggaaacccccatccacca
aagtaccagcgtctcgtcccaggccgggagaacatttctgccgaacacctggttcctcag
ctgggatacgtcgccaccagtgacggcgaggtggtggagcaggtgatcagccagcagacc
tcagagcacgacgaggctgcgatcagacgcagcaccctgttggacgaggccatccgaaac
ctgcagatccagcaggaccagcagggccagcccggggagggggaggccgctccgggggcc
gcagcagcaccggaggggcaagctgaggctcagggactattcttggtaccggcaccaagc
accccacgcagagtgtctgtgaatgaacgagcggacgtgcagtcgccccccaacgtaggt
ctgcgccgcagcgggcaggtggagggggtccgccagatgcaccagaacgcccctcgcagc
cagatggccacagagagggacctgcaggcctggaggcgcagggtggtggtgccggaggtg
gcgcccagcagctacagggagcaggagaactttcgaacagccagaggagatgaggagatg
tctctgtacaacgccaagaagagacgcattatccacagcagctgtcgagacgactcggac
gaggatgaagctgcgaggcgagcacacgcagggctggagttcatggacctgtcctgtgag
gagggggaggagacggccagttcagaggagggcgagttggatggcagtgaaatggattca
tccaatgatgaggaagagtggaaaagtgacagctcaaggttggcgggggaccagagggcc
aggagagacgtgcgccacgacagcgacgccgaggatgatgacgatgtcaaaaagccggcg
ttgcagtcgtctgttgtagctacctccaaggagagaacacgccgagacctcatccaagat
cagaccatcgatgagaggggcaaacagaggtatcacgacatgccagacgtgatcgatttc
ctcgtggtgaggcagacttatgacgaggcgctccggagaaactggcaaccgaacgacagg
ttccgctcagtgatagacgacgcctggtggtttgggatgatcgtctgtcaggagccatac
cagtccgaataccccgacagcctcttccagtgcttcaaagtcagatgggacaacggggaa
acagagaagctgagtccttgggatgtggaaccgattcaagatgacgccccgcagccggag
ctggagggaggcgggatccccgtgacggaggaggagatgagggagctgatgtacaagcct
ctgcccggggagtggggggagaggagccgggacgccgagtgtgaacgcatcatcgccgcc
atcgaccagctcatcaccgttgagatcgcagctcctttctctggccctgtggacttaatc
cagtaccccacctactgcactgagatcgcctatcccacggacctggggaccatccggctg
cgtctcctcaacagattctacaggcgtctctcagcattagtttgggatgccaggtatatt
gcacacaacgcccgcactttcaatgagccaatgagcaagatcgcccactctgcaaagatc
attactaacgtcctccagaaatttgtcaataatccgagctgcacagatatcatggagatt
tacaatgctgtggaggagatggatgatgaggatgag
DBGET
integrated database retrieval system
