Notothenia coriiceps (black rockcod): 104942112
Help
Entry
104942112 CDS
T04920
Symbol
lrrc16a
Name
(RefSeq) leucine-rich repeat-containing protein 16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104942112 (lrrc16a)
Membrane trafficking [BR:
ncc04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
104942112 (lrrc16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
104942112
NCBI-ProteinID:
XP_010765613
UniProt:
A0A6I9MQS6
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MSEEVSEVPKELLESVRDAVGRKVKLSLRRRVKLEIKGDKTENRVLALASHRAYLLTARI
PAKVEHCFNYLEIQGIACNKPTQLFIEYERGSFSLKLLSTEEVNEVVAHIGNCLLRICPG
LPPGKVMKKLTMEPPDRLTSLQTLWENNKPAEPGPCGGFSQMYRCVCDWLGLPYKEEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLSTKDYKLSADVCEQILR
VVTRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLANNPLEDRGISSLGAQF
AKLGMGLKHLNFSKTSLSPKGFGSHPKKGKEVPPSFKHFFSSAVCLNSINVSGTKLPPEA
LKALLLGLASNLNLKEVTLDLSCCELRSGGSQILEGCIAEIPNISSLDISDNGLDSDLAT
LLVWLAKNRSIRHLSLGKNFTSIKSKNLGPVLDSLVHMIQEEESPLTSLSLADSRLKSDL
TIILNALGSNSSLTRLDIGGNAMGDMGAKMLAKALQINSKLRTVIWDRNNTSPQGLQDVA
AALEKNFTIRFMPIPIIDASQALKASPEKTEDALLKIESYLYRNHETRKYLQEQAYRLQQ
GIVTTTTQQMIDRICVKVQDHLNSLRNSETDVILEDVRTAENLIKDARNSKTLLPNLYHL
GSAAREEVNSSSAGPIQEKLESMAGEVTSVMDQQLQTLLESMVDAAESLCPHVMKRSTLR
PELMQASSAKMVVPKSFVTKTLLEQSGVDIINKISEVKLSLASFLSDRIVDEILEALSTS
QLTLADHLVRRGRPLMQQGSVDLDVPEEKIPKRASTEILEGERLEDLETCMMTPKTKRKS
IHSRMLRPVSRAFEMEFDLDRALEDVPVLVEESSKTPTTPSQMFPKLEHRPPGGMVELPS
EEEKKLQHFTKLRPRRNKKKHSSKIPQINSAPSQDGEQNGLMGRVDEGVDEFFSTKVTRM
DSKRSKGSESQDGEKKKKGGFLNLIKRSTKSDKADKSEKSEKSEKSDKSEKNQATPAAPG
TSSASAPATIPEEPSSPKVALKSPALEPRSRDASSRSQPTDYSSSSDRSEELRTPDSMDE
PWECLDGRWSPQGGRRYPALQMMGSGLLAEMKAKQERRAYKSSSPDRPESNATVAKPQPT
NSESRSSSGSNNKPDSPTGSPEKTSPRAENKPDRAPRLRATSSSSSPGGPFSPKPPVPQG
AKPALAARPTIPQKPRTSSTSRSIDDISDLPSSGPGSPKVSVLPSTLKNTVSEKEKEGQT
GLQSAGSANKTTQDVRKGTVSDSLQRPGRLRVNSEDHGSFKMKDQCPKQDKDKAAGNKSS
DSVEEADKDFILI
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaagtgtcggaggtccccaaagagcttctggagagtgtgagggatgcagtg
gggaggaaggtgaagctgtcactgaggaggagagtcaaactggagatcaaaggagacaag
acggagaacagagtcttggcccttgcatcccaccgagcttacctcttgacagcacgcatt
ccagcaaaggtggaacactgctttaattacctggagatccagggtattgcttgtaacaag
cctacacagcttttcatagagtacgagcgtggctccttctctctgaagctgctgtctaca
gaggaggtcaatgaggtggtcgctcacataggaaactgtctgctcaggatatgtcccggc
cttccacctggtaaagttatgaagaagctcaccatggagcctccggacaggctgacctct
ctgcagactctgtgggagaacaacaagccggccgagcccggaccctgtggtgggttttct
cagatgtacagatgtgtgtgtgactggttggggctgccgtacaaagaagaagtacagtgg
gatgtggacaccatctatttgacacaagacaccagagaacttaacctgcaggacttcagc
catctggagaaccgggatctggtcgctataatagcagtcctggagtttaaccagtggttt
actaagctctccaccaaggattacaaactgtctgcagatgtgtgtgagcagattcttcgg
gtagtgactcgttccagtcggctggaagagttggttctggacaatgcaggactcaaaact
gattttgcccagaagctagcagctgctctggcccacaaccccagctcaggactcaccacc
attaatcttgccaacaacccactggaggacagaggtatctcctccctgggtgctcagttt
gccaaacttggtatggggctcaagcatttaaacttctccaaaacctcactatcacccaaa
ggttttggttctcatccgaagaaaggcaaagaggttccaccatcatttaagcatttcttc
agcagcgctgtgtgtctgaactccatcaacgtgtcaggaaccaagctgccgccagaggcc
ctcaaagctctcctacttggcctggccagtaatctgaacctaaaggaagtgactctagac
ctcagctgctgtgagttgcggtcgggaggttctcagatccttgaaggttgtattgcagag
atcccaaacatctctagtctagacatctctgacaatggcctggactcggacttggccact
ctgctggtgtggctggctaaaaacagatcaatcagacacctgtctctagggaagaacttt
accagcatcaagtccaaaaaccttggtccagtgctggacagcctggtccacatgattcag
gaagaggagtcgcccctcacctctctgtctctagcggactcgaggctgaagagtgatctg
accatcattctgaacgcccttggaagcaactcctctctcaccaggttagacatcggcggg
aatgccatgggggacatgggagccaagatgttggccaaggcgctacagatcaactccaaa
ctcaggactgtgatctgggacaggaacaacaccagtcctcaggggctccaggatgtagca
gctgctctggagaagaacttcacaattcgtttcatgcccatccccatcatcgatgcctcg
caggctctgaaggccagccctgaaaaaactgaggatgccttgctaaagattgagagttat
ctgtacaggaaccatgaaaccagaaagtacctgcaggaacaggcctatcggctgcagcag
ggcatcgtgaccaccaccacacaacagatgattgacagaatctgtgtgaaggtgcaggac
catctgaactctctgagaaactctgagacagacgtcatattggaggacgttaggacagcc
gagaaccttatcaaagatgccaggaactctaaaacgctgctccctaacctgtaccaccta
ggatcagctgctagagaggaggtgaacagctcctcagccggacccatccaggagaaactg
gagtctatggctggggaggtgaccagtgtcatggaccaacagctgcagactctgttggag
tctatggtggatgcagcagagtctctgtgtccccatgtgatgaagaggagtactcttcgt
ccagagctaatgcaggccagctcagccaagatggtcgtacccaaaagctttgtcaccaaa
accctcctggagcagtctggggtggatatcatcaacaagatcagtgaggtgaagctgagt
ctagcatccttcctgtctgatcgcattgttgatgagattttggaagctctttccacttcc
caactcactctggcagaccacctggtgcggcgaggtcgccctttgatgcagcaggggtcc
gttgatcttgacgtcccagaggagaagattcctaaacgggcatcgaccgagattctggag
ggcgagaggctggaggatctggagacctgcatgatgactcctaaaaccaagaggaagagc
atccacagcagaatgcttcggccggtgtctcgtgcctttgagatggagtttgacctggac
agagccctggaggacgtccctgtccttgtggaggagagttctaaaactccaacaactcca
tctcagatgtttcccaaactggagcaccgaccgccaggagggatggtggagctgccgtct
gaggaggagaaaaagctgcagcacttcaccaaactacgaccccgccggaacaagaaaaag
cattccagcaaaatacctcaaatcaacagcgctccatctcaggatggggagcagaatggc
ctcatgggaagggtggacgagggtgtcgacgagttcttctctacaaaagtcaccaggatg
gattccaaacgttccaagggttcagaatctcaagatggagagaagaagaagaaaggtgga
ttcctcaaccttatcaaacgttccactaaatctgacaaagcagataaatctgagaaatct
gagaaatctgagaaatcagacaagtcagagaaaaaccaggccacccctgctgccccgggg
acatcctcagcctcggcaccagccactatccctgaggagccgtcctctccgaaggtggca
ctgaagagccctgcgcttgagccaaggtccagagacgcctccagccgctcgcagcccaca
gattacagcagcagctccgaccgctccgaggagctgaggacgcccgactctatggacgag
ccctgggagtgtttagacggcaggtggagtcctcaggggggccggaggtacccggcgctg
cagatgatgggcagtggcctcctggcagagatgaaggccaagcaggagaggagagcctac
aagtcttccagccctgacaggccagaaagcaatgctacagtagccaagccccagccaacc
aattcagaaagcaggtcttccagtggctctaataataaacctgattccccgactggttct
ccagagaagacctctccccgtgcagagaacaagccagaccgggcccctcgtctcagggct
acgtcttcctccagttcccctggggggccattcagtcccaaacctccggtcccccaggga
gcaaagcctgctctggctgcccggcccaccatcccacagaagcccaggaccagcagcacc
agcaggagcatagatgatatctcagatcttccaagcagtgggcctgggtctcctaaggtc
tcagttcttccttccacgctgaagaatacagtgtcagagaaagagaaagaaggccagacc
ggtctgcagtcagcaggctctgctaacaaaaccactcaggatgtgaggaaaggcacggtg
tcagactcccttcagcgacctggccgtctccgtgtcaactctgaggatcacggctccttc
aagatgaaggaccaatgtccaaaacaagacaaggacaaggcagcgggaaataagtcatca
gactctgtggaggaggcagataaagactttattttaatataa
DBGET
integrated database retrieval system
