Notothenia coriiceps (black rockcod): 104942400
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Entry
104942400 CDS
T04920
Name
(RefSeq) probable polyketide synthase 16
Organism
ncc
Notothenia coriiceps (black rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PP-binding
adh_short
PKS_DH_N
CurL-like_PKS_C
ACP_SdgA_C
Thiolase_N
ADH_N
Motif
Other DBs
NCBI-GeneID:
104942400
NCBI-ProteinID:
XP_010765924
UniProt:
A0A6I9MHI4
LinkDB
All DBs
Position
Unknown
AA seq
2100 aa
AA seq
DB search
MEEAEDAIAVVGIGCNFPGGEGLDNFWKVLLEGKNCSVPIPKERFDISSWYDPDDNKAGK
SRTAKAAFINGYNEFDHRFFGISDSEVEQMDPQQKQLLQCVYRALENAGIPMEKASGTRT
GVYFGIMNRDYETNATHVHPSVINHWTGTGLAMSIAANRVSYIFNFTGPSLSLDCACSSS
LVALHLACQSIKQGDCEMAVCGGVNCIIEPRVFVALSKAKMISPGGTSKPFSNKADGYGR
GEGCGVVLLKPLKKAIHDHDNIWGIISKTAVNQDGHSVSPITKPSMTQQEELLRRIYSES
DLVNVQYIEAHGTGTPVGDQTEAGSISNVIAKAKPPGSEILRIGSVKSNIGHTESAAGVA
GLIKVLLMMKHETICPSVFYSEETASVDAKALSIKVPKESEKWEALGPRIAGVNNFGFGG
TNAHAIVKQHKQSHIEKRNGGKQKKYFVMSANSPKSLTLMTEDTIKQLDADSELDVDSLL
YTSACRRSHLKHKYRKAIIVSSKVELKEKLSATLSKNVRPSLSDPRLVFVFCGNGVTYHG
MCKQLLKHEPVFRGKIEEIGKLFQRLSKTNILDTLESEIEGSDFNKPRVIQPLLFAIQVG
ITTLLRYWGVKPDAILGHSVGEVAAAHCSGLLSLEDAVKVIYFRSTLQNRVTGGKMLVIS
NMAISEVTALLPCYSGKVCLAAFNSSQSCTLSGDADAIESIHKELSTSVNSQNLFLRVLD
VPAAYHSHMMDPILQEIKETIGSLKVNDLDIELFSTVTGKEVQHGDFCNGEYWARNIREP
VAFEQAVNSATKGKKNVVFVEIGPRRALQRNIMESLGNDTSVLTSVQPEKDHETLLSVVS
NLFELGVRVHWDTFYRGYETMPLPIPKYQFDCSDRDVIIGAAQKNTVSNHPVICQTGSES
NIFSCDLMSDSSFYLKEHKHNNIPIIPGAFYAELGLAAFMASAKPKVPLCSLQVSVNFHS
PFVLSQNSPEMKVQLEKREEDTKFMVLSPSAMYASGTVVSKKERLIEEQCISLSSIYKRC
KSVVSSEEFYGYLSQGGFQYGDVFKNKWDVHYGEDLKEAFAKVTVPEELRSQLHDYYIHP
VVLDFLMQLLPVTVEHIFAGRPGFPVKIGSLTVFEPLQDEMVVYLRAIDVGKDHLEICGC
FADKQGKVLVEVKHAIIKYLGSRSHVVEEYFYHNAFRVIPEGVTSASPPKALVFADSKGI
SKGLQQYLDLKSIYVPFQHAKDILSNGFPTLLLNLNITDIENNFDEVLFLWGQEDLTSLS
ADVILQNLASCLETFRQIVLKLKQIRFPNSIRAVTYCSSDITVDHISPGFALAGMTRSFA
AEIPELSFQLIDISSTSPKDIAALSEVLRSHPCSKYPELVVKDGQILKPSIVRTPPEIMD
SSVGRFTSTVSEPCMLQTDEAHNMTHLSAIHCKGDPEAVRDRSVEIRPSKICAHSPDYFP
VSASHLNFGQTLYWNKHSSQKHKLLALDFSGTITAVGKDVRKLKVGDQVASCYPVVAASK
VRVPEDVCYSIKRFPFLQKTPCVSYFVLAWEILHRALSRAKHHLGIISSVPDSALMKVLA
LTAYKSGWNVIVGTQCNGSFVNVNQMDVFVILPPFDESLIANICTFPGIQHVVFICESQM
QCLLAQDVIQSVKDSVHVQTIQMPVILQKGSLSAQRPYIYHWLKSLNLNRTFSLDSYTYQ
NVKSESIEILKSETPQSYFNSKKLAVVVLEKDGRSTPSDIPLLPTKKQLFRKRAVYIVAG
GLSGLGFETVKFISQRGGEYVVILSRSKPTPDVEQEIHNVEKQCGNCITSMQCDISVSEC
VHKVINAIGKTFPGCPIKGVFHSAVVLDDGLIESLNRSLYEKVLKPKVNGALNLHHATKH
CQLDYFVCYSSISAFLGNASQTNYAAANTFLDMFCQYRRKIGLSGQSINWGALNLGLLLN
KEHFQRFLEAKGMMVLDVAEIHQSLEQCLVLNLPQQAVCRFHFRNIRFNILSQNAALTMR
LSALVVEAIQKSKETDSQTKQTQTVSPKDYVVSLICETIGMDKSELKDESPLSSVGIDSM
QAMTLQNLIFQERGVNVPLVKLLDPNATLSTVVSLLSEGEGEGSSDNLEPIPIRRISTRL
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctgaagacgctattgccgtggtaggcattggatgcaattttccaggggga
gaagggcttgacaatttctggaaggttctgttggaggggaaaaactgttctgtgccaatt
cccaaagagagatttgacatatccagctggtatgaccctgatgacaacaaggcgggtaaa
tcccgcacagccaaggctgcatttatcaatgggtacaatgaatttgaccacagattcttt
ggcatcagtgacagtgaagtggaacagatggaccctcaacaaaaacagctccttcagtgt
gtctacagggcattggaaaatgccggaatccctatggagaaggccagtgggaccaggact
ggagtgtatttcggcatcatgaacagagattatgagacaaatgctacacacgtgcaccca
agtgtgatcaaccactggactggcacaggccttgccatgagtattgctgcaaacagagtg
tcctacatcttcaacttcactgggccctcactgtctctagactgtgcctgctcatcatct
cttgtggctcttcatcttgcctgtcaatccattaaacaaggcgattgtgaaatggctgtt
tgtgggggagtcaactgtattatagagccaagagtgtttgttgctctcagcaaggccaag
atgatctcacctggagggaccagcaaacccttctcgaacaaagcagatggttatggtaga
ggggagggctgcggagttgttctgctgaagccgctgaaaaaggctatacatgaccatgac
aatatctggggtatcatcagcaaaacagccgttaaccaagatggacactcagtttcccca
atcaccaaaccatccatgacacaacaagaggaactcctgcgcagaatctactcagagtct
gaccttgtgaatgtccagtacatagaggcacatgggacaggaaccccagttggagatcaa
acagaggcaggaagcatctcaaatgtcattgctaaagccaaacctcctggttcagagata
ctgcggattggctctgtgaagagcaacattggacatacagaatctgcagcgggagtggcc
ggactcattaaggttctcctcatgatgaagcatgaaacaatttgcccctcagttttctat
tctgaggagactgccagtgtagatgctaaagccctgagcattaaagttcctaaggaatca
gaaaaatgggaagccttaggtccaagaattgcaggagttaataactttggctttgggggt
accaatgcacacgccattgtcaaacagcacaagcaatcacacattgagaagagaaatggt
gggaaacagaaaaagtattttgtcatgtcggcaaattcaccgaaatctcttactctgatg
acagaagacaccattaaacagctagatgcagatagtgaacttgatgtagattcgctgttg
tacacatcagcttgcagaaggagccatctaaaacataaatacagaaaggccatcattgtt
tcatccaaagttgagcttaaggaaaagttaagtgccactttaagcaaaaatgttcgccct
tccctttcagatccaaggctagtgtttgtgttttgcggaaatggtgtcacttaccatggc
atgtgcaaacagctacttaaacatgagcctgtgttcaggggtaagatcgaagagattgga
aaactcttccaaagactgagtaaaactaacattttggacacacttgagagtgagattgag
ggtagtgacttcaacaagccacgtgttatccaaccactcctctttgctatccaagttggc
attactaccctactcaggtactggggtgtcaagcccgatgcaatacttggacactcggtt
ggcgaggttgcagctgctcactgttctggcctcttgtctcttgaggatgcagtaaaagtc
atctattttcgcagcactctccagaacagagtcactgggggaaagatgcttgtgatcagc
aacatggctatatccgaggtaactgctcttctcccttgttactctggtaaagtttgcctg
gctgctttcaacagttcgcagtcctgcaccctctcaggtgatgcagatgcaattgagagc
atccataaagagctaagcacctcagttaacagtcagaatctgttcctccgtgttttggac
gttcctgctgcttaccacagtcacatgatggacccgattctgcaagaaatcaaggagaca
attggctcgttaaaggtcaatgatctcgacatagagttgttctcaacagtgactggcaag
gaagtccagcatggggatttctgcaatggggagtactgggcgaggaacattcgtgagcca
gtagcttttgagcaggccgtgaactcagcaaccaaaggcaagaagaatgtagtgtttgta
gagatagggccaagaagggcactacagagaaacatcatggaatctctggggaatgacaca
tctgttcttacctctgtgcagccagaaaaagatcatgaaacattactgtctgttgtttct
aatctgtttgaactaggtgttcgagtacattgggacaccttctacagaggatatgagacg
atgccactgcctattccaaaataccagtttgattgttcggacagggatgttatcattgga
gcagcacagaaaaacacagtgagcaatcaccctgtgatctgtcagacagggagtgaaagt
aacattttcagttgtgatctgatgtctgactcttctttctacctgaaagagcacaagcac
aacaacatacccataattcctggggccttctatgctgagttgggcttagcggcattcatg
gccagtgccaaaccaaaagtaccgctctgctcactccaggtcagtgtcaatttccacagt
cctttcgttttaagccagaattccccggaaatgaaagtgcaactagaaaaaagagaggaa
gacactaagttcatggttctctctccatcagcaatgtatgcatcaggcacagtggtttca
aagaaagagaggctgattgaggaacagtgcatttcattaagctccatctacaaaagatgc
aaatcagtagtgagctccgaggagttttatgggtatctctctcaaggaggctttcagtat
ggagacgtcttcaagaataagtgggatgtgcactatggagaagatctcaaggaggctttt
gcaaaagtcactgttccagaagaactgcggtctcagttgcatgactactacatccatcct
gttgttttggattttctgatgcagcttctcccagttacagtggagcacatttttgcgggt
agaccaggctttcctgtcaaaatcggaagtttgacagtgttcgaacctttgcaagatgag
atggttgtgtatctgagagcgatcgatgtgggcaaagatcaccttgagatatgtggctgc
tttgcagataaacaagggaaagtgttggttgaggtaaagcacgcgataatcaagtacctt
ggtagtcgctctcatgtggttgaggagtatttctaccataatgcctttcgtgtcatccct
gaaggtgtcacatctgcttctcctcctaaggcattggtctttgccgacagtaaagggatc
tcaaaaggcctgcaacaatatttggacttgaagtctatatacgttcccttccaacatgca
aaagacatcttgagcaatgggtttcctacactcctgctaaatcttaatattaccgacatt
gagaacaacttcgatgaggtcttatttttgtggggccaagaagacctgacttcgctgtca
gctgatgttatattgcagaatttggcgagctgcttggagactttccgccaaatagtcctt
aagctaaagcaaattcgttttccaaactccatcagagcagtcacctactgttcatctgat
atcacagtggaccacataagtccaggttttgccctggctggtatgaccagatcatttgct
gcagagataccagaactttcctttcagctgattgatatcagcagcacctctcccaaggac
attgcagctctgtctgaggtcctaagatcacatccttgcagcaagtacccagagttggtt
gtaaaagatgggcagattctgaaaccttctattgtccgcactccacctgaaatcatggac
agttcagtgggcaggtttacttctacagtgtcagagccctgtatgcttcagacagatgag
gcacataacatgacccacttgagtgccattcactgtaagggggaccccgaggcagttagg
gacaggtcagttgaaattcggccaagtaagatatgtgctcattcgccagattacttccct
gtcagtgcatcacatctgaattttggccagacgctgtactggaacaaacactcatcacag
aaacacaagctactggcgcttgatttcagtggtactattacagcagtcggaaaagatgtc
aggaaattgaaagtgggagaccaggttgcttcctgttatcctgtggtagcagccagcaag
gtcagagttccagaggatgtttgctacagcatcaagcggttcccatttcttcaaaagaca
ccttgtgtttcctactttgtgctagcatgggagatccttcaccgagccttgtcaagagcc
aaacatcatctcggaatcatatcctctgtgcctgattctgctctgatgaaagtcttggca
ctcactgcttacaagtcaggctggaacgtgattgttggcacacagtgcaatggctctttt
gtaaatgtcaatcaaatggatgtttttgtcatcctgcctccgtttgatgaatcactgatt
gctaacatatgcacatttccaggtatccaacatgttgtcttcatctgtgaatcccagatg
cagtgtttgcttgctcaggatgtgatccaaagtgttaaggacagtgttcatgttcagaca
attcagatgcctgtcattttgcaaaagggatccttgagtgcacaaaggccttacatctat
cattggttaaaatccttgaacttgaacaggacattttcccttgatagctatacttatcag
aatgtcaaatctgaaagcattgagatccttaagtcagagacaccacaatcatacttcaac
tcaaagaaactggctgttgtggttttggaaaaagatggcagaagtacgccgtctgacatt
ccgttgctgccaacaaaaaaacagcttttccgaaagagggcagtgtacatagttgcaggt
ggtctttctggtctggggtttgaaactgtcaagttcatttcacaaagagggggtgagtat
gttgtcatactctctaggagcaagcccacaccagatgtggagcaagagatacacaatgtg
gagaaacagtgtggaaactgcatcacttccatgcagtgtgacatatctgtgtctgagtgt
gtgcacaaggttatcaacgccataggcaagacattccctggttgtccaatcaaaggagtg
tttcacagtgcagttgtcttggatgatgggctgattgagtccctcaacagatctctttat
gagaaagtactcaaacccaaagtcaatggtgcactgaatttgcatcatgcaacaaagcac
tgtcaactggattactttgtgtgttactcctccatctcagcttttctgggaaacgcatca
caaacaaactatgcagcagccaacacattcctcgacatgttctgtcaataccggcgcaaa
atcgggctgtctgggcagtccatcaactggggagccctaaaccttggcctcctcttgaac
aaggaacatttccagaggtttcttgaggcaaaggggatgatggtgttggatgtggctgag
attcatcaaagtctggagcaatgccttgtgctcaatctaccccaacaggcggtttgcagg
tttcacttcagaaacatcaggttcaacatcctctcacaaaatgcggccttgaccatgcgc
ctgtctgcattggtagtggaggctatccaaaaatccaaagagacagattctcaaaccaaa
caaactcaaacagtgtcaccaaaagattatgttgtgtctctgatttgtgagaccatcggc
atggataaaagcgagctgaaagatgaatcacctctttcatctgtaggcattgactccatg
caggccatgactctgcagaatctcatctttcaggagagaggcgtgaatgtgcctttggtg
aaactgttggatccaaatgctactctctcaacggtagtttctctactgagtgaaggtgaa
ggtgaaggttccagtgataacttggagcctattcccattagacgcattagtaccagattg
taa
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