Notothenia coriiceps (black rockcod): 104942456
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Entry
104942456 CDS
T04920
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104942456
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
104942456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
LRR_1
Ig_2
fn3
LRR_LRWD1
C2-set_3
C2-set_2
LRR_5
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
104942456
NCBI-ProteinID:
XP_010765981
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MFLVLLLGLYLGTGELFSPVSSCPSQCSCFYHNLSDGSKARSVICNDPEISLVPVGFPVD
TSKLRIEKTSIQRIPSEAFIYLSSLEFLWMSFNTLSALSPDSFRGLLNLEELRLDGNALT
AFPWDSLMDMPSLRLLDLHNNQLTMLPAEATTFIKNLTYLDLSSNSLLTLSAEVLSTWLI
AKPVQGPDSSKMILGLHDNPWVCDCRLYDLIQFQKSPTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRKADGRQLNGTVQQE
TSKEGITWSILSVPAVSYRDSGKYICKATNYAGNAEAVISLVVSNSSKTEGNQTSNDKKA
KVKKPKPVGKAAYQEKLVARYVVPTSTPSTLPALDPGLPPGLGPDPGRGSYSLADRATLG
PATSSNPDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVFIEGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATSTQKLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKTKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRVNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcctggggctttacttaggcacaggtgagcttttctccccagtg
agctcctgcccgtcgcagtgcagctgtttttaccacaacctgagtgatggatcaaaggcc
aggagtgtgatctgcaatgatcccgagatatctcttgtgcctgtcgggtttcctgttgac
acgtccaaactgcgcattgagaagacgtccatccagcggataccgagcgaagccttcatc
tacctctccagtctggaattcctgtggatgtctttcaacacgctctccgccttgagcccg
gacagtttccggggactgctcaacttggaggagcttcgtctggacgggaatgccctcacc
gcctttccctgggactctctgatggacatgcccagtctcagacttctcgatttgcacaac
aaccagctcaccatgctgccagcggaggccaccactttcatcaagaacctcacctacctg
gatctgtccagcaacagcctgctgaccctgtcggcagaggtgctgtccacctggctcata
gcaaaacctgttcaagggccagatagctccaagatgatacttggtctccacgacaacccc
tgggtgtgtgactgtcggctctacgacctgatccagttccagaagtctcccactctctcg
gtggcgttcattgacacaaggctccggtgttcagctccagagagtgtatccggggttttg
ttcagtgacgcagagcttcggcgctgccagctcccacgtatacacacagctgtggcacga
gtccggagcgctgttgggaacaatgtgctgctgcgttgtgggaccattggagtccccatc
ccagacctgacatggcgcaaggcagatgggaggcaacttaatggaacagtccagcaggag
acctcaaaagagggaatcacttggtccatcctcagtgtccctgctgtgtcctatcgggat
tcggggaaatacatctgcaaggccactaactatgcgggaaatgctgaagctgtcatttct
cttgttgtctctaactcgtcaaaaacagaggggaaccaaaccagcaatgacaagaaagcc
aaagtcaagaaacccaagcctgttggtaaagctgcctaccaggagaaactggtggccaga
tatgtggttccaacctcgaccccttcaaccctgcccgccctggatccaggccttccacct
ggtcttggtcctgatccgggacgaggcagttacagcctggcagacagagccaccctgggg
cctgccacctcctccaacccagatgcactgttggatctggagaagactaatctaagcaac
ctggcggccaacacgtcatcactgcagcaggaccccgacagggtggtccgctcagtaaag
gtggtgggggacacagacaataccatttctttgaactggagagcccctaaggccaagaac
acaacagcgtttagtgtgctgtatgctgtgtttggagagagggacatgaggaagatcaat
gttggggcagggcaaaaccgtgtattcatcgaaggcctggtgcccagaaccaagtacatt
gcttgtgtttgtgtgagggggctgatccccaagaaggagcagtgtgtgatattttccact
gatgaagcagccagtgcaacttcgacccagaagctgattaatgtgattgtgatcacggtg
gcctgtatcatcgcagtcccgctcactgtcatcgtgtgctgcggggctctgaagagacgc
attcaaaagtactggggaaagaaaaccaaggacatccaagattcatatgtgacctttgaa
acactgtcgcctggtacgaaggccaaagggcttgagggcgagtatttgaacagagtgaac
ccagaggaatccaacaggcttctgtcggcccgatccagcctggactctgaggccacggct
aagatagagggacaacctaacgagtacttctgctga
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