Notothenia coriiceps (black rockcod): 104942512
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Entry
104942512 CDS
T04920
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104942512 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104942512 (snrpd2)
03032 DNA replication proteins [BR:
ncc03032
]
104942512 (snrpd2)
Spliceosome [BR:
ncc03041
]
Complex A
U1 snRNP components
Sm proteins
104942512 (snrpd2)
U2 snRNP components
104942512 (snrpd2)
Complex B
U1 snRNP components
104942512 (snrpd2)
U4/U6.U5 tri-snRNP components
104942512 (snrpd2)
Complex C
U2 snRNP components
104942512 (snrpd2)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104942512 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
NUMOD4
GIT1_C
Motif
Other DBs
NCBI-GeneID:
104942512
NCBI-ProteinID:
XP_010766045
UniProt:
A0A6I9MWU8
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENV
KEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIIVLRNPLITGK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgaggagctgcagaaacgcgaggaagaggagttcaacaccggccctctgtcg
gtgctcactcagtccgtgaagaacaacacgcaggtcctcatcaactgccgcaacaacaag
aagctgctcgggagagtcaaggccttcgacaggcactgcaacatggtcttggagaacgtg
aaggagatgtggacggaggttcccaagagcgggaaggggaagaagaagtcaaagccggtg
aataaggaccgctacatttccaaaatgttcctcagaggagactccgtcatcatcgtgctg
aggaaccctctcatcacggggaaatga
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