Notothenia coriiceps (black rockcod): 104943044
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Entry
104943044 CDS
T04920
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104943044
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104943044
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104943044
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
104943044
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104943044
NCBI-ProteinID:
XP_010766667
UniProt:
A0A6I9MQI7
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Position
Unknown
AA seq
517 aa
AA seq
DB search
MILNPRSARLVPRDLTGAPPSARLRRRAHFYYLTDLYCFILFSSPAQIEVIPCKICGDKS
SGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRNRCQHCRLQKCLALGMSR
DAVKFGRMSKKQRDSLYAEVQKHQQSQECAGLGVRVENTDMADHSRTYRRGSSTTLSDLD
DITMLQEGLLFDLPLTPEEAGREYCNLDMLGGSAGSSSSSQSSPEQTSLDFAEGNHSIKH
EYQLLHDSGLFSHAILNPLPEGCSMLEIERITQSVLKSHVETSHYSTEELKRMAWTLYSP
EETRSFQTKSAEMMWQQCAVHITNAIQYVVEFAKRISGFLDLCQNDQIILLKAGCMDVLL
IRMCRAYNPINNTMLFDGKFATAHLFKALGCDDLVNSVFDLAKTLSRVQMSEEEMALFSA
AVLLSPDRPWLTDVQKIQKLQEKVYVALQGCLQKEGATEQKLAKMVSKLPILKSICNLHI
DKLEFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcaacccgcggtccgcccgcctcgtgccccgtgatctgacgggcgcgccaccc
tccgcgcgccttcgaaggagagctcatttctactatttaactgatttgtattgcttcatt
ctcttttcctctccagctcaaatagaggtaataccgtgtaaaatctgtggggacaaatca
tccgggattcactatggtgtcatcacctgtgaaggctgcaagggttttttccgccgcagc
cagcagaacaatgcgatgtactcctgctcgcgacagaggaactgtttaattgacaggacc
aaccgtaaccgctgtcaacactgcaggctgcagaagtgtctcgctctgggcatgagccgt
gatgcggtcaagtttggccggatgtccaaaaagcagcgtgacagcctgtacgcagaggtc
cagaagcaccagcagtcccaggagtgtgcgggactcggagtccgcgtggagaataccgac
atggccgaccacagccgcacctacagaagaggctccagcaccacgctcagcgacctggac
gacattactatgctgcaagaaggcctgctcttcgacctgccgctgaccccggaggaagcg
gggagagagtactgtaacctggacatgctgggcggcagcgcaggcagcagctcctcctct
cagagttcaccagaacagaccagcctggactttgcagaaggcaaccacagcatcaagcat
gagtaccagctgctgcacgactctggactcttctctcatgctatcctcaacccgctgcct
gagggctgctccatgctcgagatagagcgtatcactcagagtgtcctgaagtcccacgtt
gagacgagccattacagcacagaggagctgaagagaatggcgtggaccctgtatagcccc
gaggagacccgttcattccagaccaagtcagctgagatgatgtggcaacaatgtgccgtt
cacatcaccaatgcaatccagtacgtggtggagtttgccaagcgtatctctggcttcctg
gacctgtgtcagaacgatcagatcatcctcctcaaagcaggctgcatggacgttcttctg
atccgcatgtgtcgggcctataaccccatcaacaacactatgctgtttgatggaaagttt
gccactgcacatctcttcaaagctcttggctgtgacgaccttgtgaattcagttttcgac
ctagctaaaaccctgagtcgtgttcagatgtcagaggaagagatggctctcttcagcgct
gctgtgctgctctctccagaccgcccctggctgacggatgttcagaagatacagaagttg
caggagaaagtgtacgtggctctgcagggctgcctacagaaagagggagcaacagaacag
aaactagctaagatggtgtctaagctacccattctgaagtccatttgcaaccttcacatc
gacaaactggagtttttccgtctggtccaccccgagacagcgtacaccttccctcctctg
tacagggaggtttttggcagtgaaatcaccttcccagactccacagagggctaa
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