Notothenia coriiceps (black rockcod): 104943060
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Entry
104943060 CDS
T04920
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104943060
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104943060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_6
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
zf-BED
zf-C2HE
RRN3
Motif
Other DBs
NCBI-GeneID:
104943060
NCBI-ProteinID:
XP_010766682
UniProt:
A0A6I9MQK2
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MCGSSQGFTASSSQCTTAMLTLENSPQSSGVITTAMPETQDADMASWSEANFEEKCTYIV
KDHLLEEGSENKNKTRAEKSLPRNLALKRCHDSTEVLGVTSKELIPQGTRFGPLVGESYT
NETLPKDPDRKYFWRVFSEGHLHHILDGLNEERSNWMRYVNPACSVQEQNLVACQSGLNI
YFYTIKPLQPGQELLVWYCPEFARRCNYPPLGRLAIDSIEPSQAQEKTTLKRGHSVSEIL
RDEPSKSLPACPRRLSSPLSQTNLSAVFPLCPRVVYPTQPHSESIHGQRYVTQPPVPSCS
PPAAKRPALSGPSSLHFTLQHSQSPVTAKPYQKPSVPDRVHPALRHSPYLLPHYSLGLNS
ILPQSFPFYRDQMKHHFPSHLLPFDSYAHIHPSLANGHKDLTLALSNTKQDLILSQNSEH
RDNKDLITEWTNYLRCPSDDLRDFRQSTSSNVHADLSLPASSSASSMATSLRRALPSLAP
GGCSPPVGKAAFSDCLPSKPTSATQRQTEDAMDLRKIKRGGHIIGYKTLSYPLTRQNGKI
RYDCNICGKIFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKPHEC
KVCHKRFSSTSNLKTHQRLHSGERPYLCKLCPARFTQYVHLKLHKRLHTGERPHRCPCCP
CAYLHYCSLQVHLQGFCPLSPSVSHRHSPEELHRVNAEIERFDMSEAAEQLEAMAADAEM
DKGNVFDLIKKMESRTSGHHEEEEAELSMYKSAVLPHHGSPLPLHPTSIKLESGCPSEP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcctctcagtgcaccacagcaatgtta
acattagaaaactcaccgcagagctcaggggtcatcacaacagcaatgccagagacgcag
gacgcagacatggcatcatggagcgaggcaaactttgaggagaagtgcacatatatcgtg
aaggaccatcttctggaggaagggtccgaaaacaagaacaagacacgagccgagaaatct
ttacccagaaacctggccctgaagcgctgccacgactccacagaggtgcttggggtgacc
agtaaggagctgattcctcagggaacacgttttggccctctggtgggggaaagctacacc
aacgaaacgctaccgaaagatcccgacaggaagtatttctggagggtcttctcggagggg
catttacaccacatcctggatggtttgaacgaggagcggagcaattggatgcgttacgtc
aacccagcctgttctgtgcaggaacagaacctggtggcctgccagagcgggttaaacatc
tacttctacaccatcaaacccctgcagccgggccaggagctcctggtgtggtactgtcct
gaattcgcccggcgctgtaactaccctccactgggtcgactggctattgacagtattgaa
ccaagtcaagctcaggagaagacaacattgaaacgaggacacagtgtctctgaaatcctt
cgagacgagccttccaagtccctgcctgcctgccccagacgtctgagtagccccttgtct
cagaccaacctctcagcagtttttcccctgtgtccccgtgttgtatacccgacccagccc
cactcagaatccatccatggccaaagatatgtgactcaaccacctgtgccatcctgtagc
cctccagctgcaaaaagaccagctcttagcggtccctccagtttgcacttcacccttcag
cacagtcaaagccctgttacagccaaaccttaccaaaagccctctgtacctgatcgagtc
catcctgctctgaggcattccccctatctactgcctcactactcgctcggacttaacagc
attctacctcagtcattccccttctacagagaccaaatgaaacatcacttcccatctcat
ttgctgccttttgacagctatgcacacatccacccttctctggctaacggacacaaagac
ttgacacttgcactatccaacaccaaacaagacctcattctttcacaaaacagtgagcac
agagacaacaaggacctcataaccgaatggacaaactacctcaggtgcccttccgatgac
ctcagagatttcagacaatctacaagcagtaatgttcatgcagacctcagtttacctgca
tcatccagtgcctcatccatggccacctccctccgcagagcactgccatctcttgcgcct
ggaggatgttcaccaccagtgggtaaggctgccttttcagactgcctcccttccaaaccc
acctctgccactcagagacaaactgaggatgcaatggacctcaggaagatcaaacgaggt
ggacatattatcggctacaagacgctgtcatatcccctcaccaggcagaatggaaagatc
cggtatgattgcaacatctgtggaaaaatctttgggcagctgtccaaccttaaggtccat
ctgcgagtgcacagcggggagcgtcccttcaggtgtcagacctgcaataagaacttcaca
cagctggcccacctgcagaaacactacctggttcacactggagagaagcctcatgaatgc
aaggtgtgccataagcgattcagtagcacaagcaacttaaagacccatcagcggctacac
tcaggtgagaggccgtacctgtgcaagctctgcccggcccgctttactcaatacgtacac
ctaaagctccacaaacggctccatactggtgaacgacctcacaggtgtccttgttgcccc
tgtgcctatctccactactgcagcctgcaggtgcacctccaaggcttctgccctctctcc
ccctcggtctcccacagacactccccggaggagctacaccgagtcaacgcagagattgag
aggtttgacatgagcgaagcggcagagcagcttgaggccatggctgcagatgctgagatg
gacaagggaaatgtttttgacttgataaagaagatggagtctcgtacctctggccaccac
gaagaggaggaggccgagctgagcatgtacaaatctgcagttctgccacatcatggcagc
cctctacctctgcatccaaccagtatcaagctggagtcaggctgcccatcagagccctaa
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