Notothenia coriiceps (black rockcod): 104943117
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Entry
104943117 CDS
T04920
Name
(RefSeq) vacuolar protein sorting-associated protein vps5-like
KO
K17917
sorting nexin-1/2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104943117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104943117
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104943117
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Macropinocytosis
Sorting nexins
104943117
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104943117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
Sorting_nexin
Motif
Other DBs
NCBI-GeneID:
104943117
NCBI-ProteinID:
XP_010766738
UniProt:
A0A6I9MTZ3
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDVLETEEVGGRDSDEDDGDDLFMSTSNPPLAGMDSILSPTIE
PSNVLTKPPVDLMDGPLFEPVSIQTANTPFSKVMSEPSDDFVDLTNNITDSPDEEDTAES
PVADAEEDKTEIPLDEPAEEFEDIFGSETEAPQEEVVEADVTVEETPTDKLEEASSVTVP
YVDGKTGSDEEGEAIETSTVPIINLGADLPAVETEQPPPASQAFVDPLEDLLSDVSPAAE
TQQPPPASVTFADPLVDVIIDDSPTTETQQPPPASQTFSDPLVDLLSAAASAAEAKIATP
ATVDLFDEEGSDFFTEARQTKPAKQQKSLFGEADEDLFGEPLGATSKKAVSTEPKDKPVK
TKAASTDVSNMGGPLQDSTPAEPADLFSEEAVATVPIAKNTSAASSKTNGVHSEEEMDIF
AEATVELSLDSPREERKKDVTVAPSTSAAPPLSAAGSLVKPQAAALEELEEEEEEEEQED
KFEILVSVKDPEKVGDGMNAYMGYKVTTQTQMPMFRNKAFAVRRRFSDFLGLYEKLSEKH
GPNGFIVPPPPEKSILGMTKVKVGKDDSSAADFVERRRAALERYLQRVVNHPSLLQDPDV
REFLERDELPRATSTQALSGAGFLKMINKATDAVSKMTIKMNESDVWFEEKLQEVESSDQ
HFRKLHVLVESLVVHRKGQPIKH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcggagcgtagtcctcctccgtttcccgactccgaggaccaagatgtg
ctggaaaccgaagaagttggaggccgagacagtgatgaagacgacggggacgatctcttc
atgagcacaagcaaccctccactggctggtatggacagcatactgtctcctaccattgaa
cccagtaatgttttaacgaaacctcccgttgacctcatggatggccccttattcgagccc
gtcagcatccaaacagcaaacacaccattcagcaaagtcatgagcgaaccctcggatgat
tttgtcgacctaactaacaacatcaccgactctccggatgaagaagacacagctgagagt
cccgttgcagatgcagaagaggacaaaactgaaatccctttagacgagcccgcggaggaa
tttgaagacatatttggaagtgaaaccgaagccccgcaagaggaagttgtagaagcagat
gttactgttgaagaaacgccaacggataagcttgaagaggccagtagtgttacagttcca
tatgttgacgggaaaacaggaagtgatgaggaaggggaagcaatagaaacttccactgta
ccaattatcaacctcggtgctgatttgccagccgttgaaacagaacaaccgccacctgcc
agccaagcattcgttgaccctttggaagaccttctcagtgatgtttcgcccgccgcagaa
acacaacagccaccgcctgccagcgtcacatttgctgaccctttggttgatgtcatcatt
gatgattccccaaccactgaaacacaacagccaccgcctgccagccaaacgttcagtgac
cccttggttgacctccttagtgctgctgcgtctgctgccgaagccaaaatagccacaccg
gcaacagtcgatcttttcgacgaggaggggagcgactttttcacagaagcacggcagacc
aaacctgccaagcagcagaagagcctcttcggagaagcggacgaggatctgttcggtgag
ccgctgggtgccacctcaaagaaagctgtgagcacggagccgaaggacaaacccgtcaaa
accaaagctgcttccactgatgttagcaacatgggggggcctctgcaggacagcactcct
gcagaacctgctgatctcttcagtgaggaagccgtcgccaccgtgcccatcgccaaaaac
accagcgccgccagctccaagaccaatggagtccactctgaagaggagatggatatattt
gcagaagccacagtggagctttccctcgacagtccgcgggaagagagaaagaaagatgtg
acagtcgcaccgtctacgtccgccgccccccccctgtcagctgctggcagcctggtgaag
ccacaagctgctgccctggaggagttggaagaagaggaagaagaagaagaacaggaagac
aaatttgagatcctggtgtctgttaaagatcctgaaaaagttggggatggaatgaacgcc
tacatgggctacaaagtaaccacacagacccaaatgccgatgttccgcaacaaggcgttc
gccgtgaggcgacgcttcagcgacttcctcggcctctacgagaagctttctgaaaaacat
ggaccaaatggattcatcgtgcctccgcctccagagaagagcatcctgggaatgacaaag
gtgaaggtgggaaaggatgattcttccgcagcagactttgtggagagaagaagagctgct
ctggagaggtatctccagagggtggtaaatcacccgtcactcctccaggatcctgatgtc
agagagtttctggagagagatgagttgcccagagcaacgagcacccaggctctgagtggc
gccggcttcctgaaaatgatcaacaaagcaacagatgctgtcagtaaaatgaccatcaag
atgaatgagtcagacgtgtggtttgaggagaagctgcaggaggtggagtcttcagatcag
cacttcaggaagctccacgtgctggtggagtctctggtggtccacaggaaaggtcagcca
atcaaacactga
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