Notothenia coriiceps (black rockcod): 104943187
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Entry
104943187 CDS
T04920
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc03015
mRNA surveillance pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104943187
09122 Translation
03013 Nucleocytoplasmic transport
104943187
03015 mRNA surveillance pathway
104943187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104943187
03041 Spliceosome [BR:
ncc03041
]
104943187
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104943187
Spliceosome [BR:
ncc03041
]
Complex C
Other components
EJC/TREX
104943187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP
Motif
Other DBs
NCBI-GeneID:
104943187
NCBI-ProteinID:
XP_010766830
UniProt:
A0A6I9MYY0
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNALIKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLAKQQELLHERLEREAQQDEAVDESSAVLEEDEDHSEDN
DSSSYVSDKKNRSIPPKPLLPRAEERGGGDAGMVHGMMACGPDMGLGPTLPPQEFLEAPG
ARMQRATFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVPRAQEKEGTAPSEPGS
AHPVLHLSRSAGVSGGSQAREDSDDDDSDDESEDDEDWGPGPGGARRGNRAPPQPQQMPP
SFPSTVARSKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPDLFPLPDTPKQSPPDTED
QEGDRPEASRGPRGPSFPPSTMQRQDSDSSSRSSSPEPSMKRRPGPLSLLAHRMDSEGAF
RAAEATSAVDLSGEATAHSTAAFASFGDSPLKRLERKRLQENRDVEEERRLKEEKEREQQ
QKQERERMKIQEQEIERGRLEEERKRLEEEEKQREKERKRQEEEKERKHQEEEKERKHQE
EEKERKHQEEEKERKHQEEEKIREGKLQKEKERKHQEEEKIREGKLQKEKERKHQEEEKI
REEKERKQETAHKGRVAVTEAQDSGSSSDSDSSSHSSSSSSGVTTGPARQLKKPKQGHKA
EEEKKKTDLSKGAEKQHVSTRSVSIDEIHLKVG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgggttgcggat
ttaaaagctgctttggagcaaagaaacctgcccaagagcggacagaaaaatgcactcatt
aagcgactgaaaggggctctgatgctcgaaaatctccagaagtcgtcgtcctctcacagt
gggctgcagcccaactcgcagattggtgaggagatgagccagaatagcttcataaaacag
tacctggctaaacagcaggagctccttcacgagaggctggagagagaggcccagcaggac
gaagcagtcgacgaaagctcagccgtgctggaggaggacgaagaccattcggaggacaat
gacagttcctcctatgtcagtgacaagaagaatcgctccataccccccaagcccttattg
ccccgggcagaggagagaggaggaggagatgcagggatggttcacggaatgatggcgtgt
ggccccgacatgggcctgggtcctaccctccccccccaggagttcctcgaggctccagga
gctaggatgcagcgagccacctttcaccagggacacaaggagcccccggccccgtctccc
ccccgcgccgtagcctccctgtcggtgcgcgtcctgggccagcccgaccgccaggggctg
ccccccgccgtgccgcgagcccaggagaaggagggcaccgcaccgagcgaaccgggatcc
gcgcaccccgtcctccacctcagccgatcagctggagtctcaggggggagtcaggctcgc
gaggacagcgatgatgacgacagtgacgacgagagcgaggatgatgaggattgggggccc
ggtcccggcggggcgcggaggggaaacagagcgccgccccagccgcagcagatgcctccc
agcttcccgtcaacagttgccagatccaaacgcaagctccagcctccccagcacatccca
ccaccacaggtacaccacacaccaatgcaactgcgccaccccacccctcctccctctccc
ccccctgacctgtttcccctacctgacactcccaaacagagcccaccagacacagaggac
caggaaggagataggcccgaggcttcgcgtggtcccagggggccgtctttcccaccttcc
accatgcagaggcaagactctgactcgagctctcgttccagcagtccggagccttctatg
aagcgaaggcccgggcccctctctctgctcgcacacaggatggactctgagggggctttc
cgtgcggcagaggccacctccgctgtggatctgtcaggagaggcgacggcacactccact
gccgcgtttgccagttttggtgattctccgctgaaaagattggagagaaagaggctccaa
gagaacagagacgtggaggaagaaaggcgcctgaaggaggagaaagagagagaacaacag
cagaagcaggagagagaaagaatgaagatacaagagcaggagatagagaggggacgcctg
gaagaagagaggaaacgcctggaagaggaggagaagcagcgtgaaaaagagcgaaagcgc
caggaagaggaaaaggagaggaaacaccaggaagaggagaaggaaaggaaacaccaggaa
gaggagaaggagaggaaacaccaggaagaggagaaggagaggaaacaccaggaagaggag
aagatacgagaggggaaactgcaaaaggagaaggagaggaaacaccaggaagaggagaag
atacgagaggggaaactgcaaaaggagaaggagaggaaacaccaggaagaggagaagata
cgagaggagaaggagaggaaacaggagacagcccacaaaggcagggtggctgtgactgag
gcccaagactcaggttcctcatcggactccgactcctcttcacactcgtcctcctcctcc
tccggggttacaaccggccctgccagacagctgaagaagccaaagcaaggacataaagca
gaggaggagaagaagaagactgaccttagtaaaggggcagagaaacaacacgtttcaaca
aggtcagtatccatcgatgaaatacacttaaaggtggggtag
DBGET
integrated database retrieval system
