Notothenia coriiceps (black rockcod): 104943188
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Entry
104943188 CDS
T04920
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104943188
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104943188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
zf-rbx1
U-box
zf-Nse
zf-RING_10
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
104943188
NCBI-ProteinID:
XP_010766827
UniProt:
A0A6I9MR02
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MASRSEEDLCCAVCQDIFRDPVLLSCSHSFCGGCLTDWWREKITRECPLCKRRSSRGKPP
CNLVLKNLCEAFQRERDENASEALCNLHSEKLKLFCLDHRQPVCVVCRDSEKHINHSFRP
IDEAARQHRMELQNTLKPFRKKLDAFEKAKKEFDGTAEHLKVQARRTETQIKEQFQKLHQ
FLEEEEGARMAALREEEEQKSRVMEGKMEAVSREIAALSHTLRATEEEMKADHASFLNNY
QAAVERLQRPLLEDPQLPPGALIDEAKHLGNLTFNIWSKMSYLVSYFPLVLDPNTAHPEL
ILSEDLTSVMEGGRQKRPDNPERFDAFCGVLASEGFNSGSHSWDVEVGDSREWILGVLAE
SVPRKRDIRSGLWTLWFGEGEYSALSLPAPPSQLVFRKKLQRVRVNLDWNRGKLSFSDPD
TSTHIHTFTHTFTEKLFPYICTVDKHLLKILPLKVGVTQQKV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagatcagaggaggatctctgctgtgcggtctgtcaggacatctttagagac
cctgttctcctgtcatgcagtcacagcttctgtggaggctgtctgacggactggtggaga
gagaaaataacacgtgagtgccctttatgcaagagaaggtcatcgaggggaaagcctccc
tgtaacctggtgttaaagaacctctgtgaggcctttcaaagagagagggatgagaacgct
tcagaggctctctgcaatctgcactctgagaaactcaaactcttctgtctggaccatagg
cagccggtgtgtgtcgtctgcagagattcagaaaaacatattaaccacagcttcagaccc
atcgatgaagctgcgcgacaacacaggatggaacttcagaacactctgaaaccctttagg
aagaagttagatgcttttgaaaaggctaaaaaggagtttgatggaacagcagaacacctg
aaggtccaggccagacgcacagagacgcagattaaggagcaatttcagaagcttcaccag
tttctagaagaggaagagggggccaggatggctgcactgagggaggaagaggagcagaag
agtcgggtgatggaggggaagatggaggctgtgagcagagagatagcagctctttcacac
acactcagggccacagaggaagagatgaaagctgaccacgcctccttcctgaacaactac
caggctgcagtggagaggctgcagcgccccctgctggaggatccacagctgcccccagga
gctctgatagacgaggccaaacacctgggcaacctcacctttaacatctggagcaagatg
agctacctggtctcctatttccctcttgttctggacccaaacactgctcatccagaactc
atcctgtctgaagatctgaccagtgtgatggaaggagggagacagaaacgtcctgataat
ccagagaggtttgatgctttctgcggtgtcctggcctcggagggctttaactcaggctct
cacagctgggatgttgaggttggagacagtagagagtggattctgggtgtgttagcagag
tctgtcccgaggaagagagacatacggtctggattgtggacattatggttcggtgaaggt
gaatactcagcactgtcacttcctgctccaccctctcaactcgtattcaggaagaagctg
cagagggtcagagtgaatctggactggaacagaggaaagctttcattctctgatcctgac
actagcacacacatacacaccttcacacacactttcactgagaagctgtttccgtacatt
tgcactgtggataaacacctcctgaagattttaccactgaaggtcggtgtgacacaacag
aaggtctga
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