Notothenia coriiceps (black rockcod): 104943204
Help
Entry
104943204 CDS
T04920
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104943204
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncc01009
]
104943204
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104943204
Protein phosphatases and associated proteins [BR:
ncc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104943204
Cell adhesion molecules [BR:
ncc04515
]
Cadherins
Protocadherins
104943204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
104943204
NCBI-ProteinID:
XP_010766843
UniProt:
A0A6I9MUA2
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MAALRREVLIFFSVVLLVSCGASPTDILYRVPEEQPPNTLIGSLASDRGLPDTGHLYKLE
VGSPYLRVDGKSGDIYTTEIPIDRETLKDCRNLFEEDKCFLEFEVSITDMVNGLGSGPRL
IEGRIEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMANDRDSGHNGVAEYTLSTGP
DADQLFSLQVALDSDEKLPQLVVMGNLDREMKDSYDLNIRVVDGGEPPRASSALLRVTVT
DQNDNAPKFERSHYEAELQENSPQGHSVLQVRANDADTGTNGEIDYSLHQASEAVQRLLR
IDRSTGVIYVKGLVDREEESFLKFFVFAKDRGPNSKSSKVQVIISVRDQNDNSPAIEIRG
IGLVTHHNGVANISEDMHIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESSND
RKRKYFLQTTTLLDYENIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPIFSPSRV
EVDFAEGNQPGDKVLVITAADADSGSNEELVYSIIDLHATRLFEIQPNSGEIRVKNMLDR
EETEQYEFRVAAADKGIPSKTGTATVVINVLDRNDNDPKFMLSGYSFSVIENMLPLNPVG
VVTVTDADKGENARVRLYVEPDNGKFIIQNGTGTILSSISFDREKESTYSFRLKAVDAGD
PSRSSYVGVTINVLDENDNAPYVTKPANSSYKYMSPVTPLDTRVEVVEAEDIDSGPNAEL
VYTITGGNPYHLFDISPDSGEITLVEEFTGKHNGLHRLVVKVSDKGKPPRHTTALVHVFV
NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVIMVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPVEEDEEASLQK
GLKFNLINENVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIMLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNTSTGSDQYSDYSYKANPPKYSSKQVGDYANTYQRDIYWTNRVW
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgaggcgggaagttctgatcttcttttcggtcgtcctgctggtttcctgc
ggcgcctcgcccaccgacatcctgtaccgagttcctgaagagcagccgcccaacacgctg
atcggcagcctggcgtcggaccggggtcttcccgacaccggacacctttacaaactggaa
gtgggatcgccgtacctacgagtggacggaaaatccggcgacatctacaccaccgagatc
cccatcgaccgcgagacgttgaaggactgccgcaacctgttcgaagaagacaaatgcttc
ctggagttcgaggtgtcgatcacagatatggtgaacggtctcggatcgggaccacggctg
atcgaggggcgcatcgaggttttggacatcaacgataacacgccgcagttctcctcgccc
atcctcaccctctccatccccgaaaacacacacatcggcgccctcttctccatccccatg
gccaacgatagagactctggacacaacggggtggcggagtatactctgagcaccggaccg
gacgcagaccagctcttcagccttcaggtggctttggattcggatgagaagttaccacag
ctggtggtcatgggtaatctggaccgcgagatgaaggactcgtacgacctgaacatccgc
gtggtggacggaggggaaccgccgagggcgagcagtgccttgttgagggtgaccgtcacc
gaccagaacgacaacgcaccaaagttcgagaggagtcactacgaggcggagcttcaggag
aacagcccccagggacactctgtgctgcaggtccgagcaaacgatgcagacaccggaacc
aacggagagattgactacagcctccatcaggcatctgaggcagtccagaggcttctgcgg
atcgaccggtctacgggcgttatctacgtcaaggggctggtggaccgcgaggaggaaagc
ttcctcaagttctttgtgttcgccaaagatcgtgggcccaactccaagagctccaaagtc
caagtgatcatcagcgtcagggaccagaacgacaactcccctgccatcgagatccgtggt
atcggtttggtgacgcatcacaatggggtggccaacatctctgaggacatgcacatcggc
acacctgtggcgttggtccaggtgtcggaccgtgacgagggggaaaatgcggtggtgacg
tgcgtggttgccggtgatgtcccctttcagcttcgacctgcaagcgagtcctccaacgat
cggaagaggaagtacttcctgcaaacaactaccttgctggattatgagaatattaaggat
tacaggattgaaattgtcgctgtggattctggaaaccctgccctgtcgagcaccaactcc
ctcaaagtacaggtcacagacattaatgacaacacgccaatcttttccccttcacgagtt
gaggtggactttgcagagggcaaccagccaggtgacaaggtgctggtcatcacggcggca
gatgcagacagcggctctaacgaagagctggtctacagcatcatcgacctccatgccacc
aggctctttgaaattcaacccaactctggagagatccgtgtgaagaacatgctggaccgg
gaagagacggagcagtacgagtttcgagtggcggcagctgacaagggcattcctagcaaa
actggcactgctaccgtggtgattaatgttctggaccgcaatgacaatgacccaaagttt
atgctcagcggctacagcttctccgtcattgagaacatgctgccactgaatcctgtcggt
gttgtgaccgtcactgatgcagataagggtgagaacgcccgggtgaggctgtatgtggaa
ccggacaatggtaaatttatcatccagaacggcacaggaaccatcctgtccagcatatcc
ttcgaccgtgagaaggagagcacctactccttccggctgaaggctgtagatgctggtgac
ccatctcgatcctcctatgttggggtgacaatcaacgtcctggacgagaatgacaatgct
ccctacgtcaccaaaccagctaactcctcctacaagtacatgtcacccgtcaccccgctt
gacacccgtgtggaggtagtagaggctgaagacattgactctggacccaatgctgagcta
gtctacaccatcacaggcggcaacccgtaccacctgttcgacatctcgcccgacagcgga
gagatcacactggtggaggagttcaccggcaaacacaacgggcttcaccgcctggtggtg
aaagtcagcgataaaggcaaacctcctcgccacaccaccgccttagtccatgtttttgtc
aatgacaccaagtccaatgtgtccctcatcgaggcacttgttggacacagtctctacacc
cctctggacagggacattgccggagatcccaactacgccctcgctcagcgcagcaacatc
ctgtacggcagccttgcgggtattgctggtgtgattatggtcattgtcgcggtngtagta
atcagacaccgactgcagaaggacactaagagtggctaccaggccggcaagaaggagagc
aaggacctttacgctcccaagcaaggccccaaaaatggcaaagggaagaagagcaaaaag
ggaaaagctcccaaaccggcgaagccagtggaggaggacgaggaggccagcctgcagaaa
ggcctcaagttcaacctcatcaacgaaaatgtaaacgatagtcccagaatccacttgccc
cttaactacccaccgggaagccccgatctgggacgtcactaccgctctaactcccctcta
ccctccatcatgctgcagccccagtcgccctccgcctccaagaagcaccaggctgtccag
gacctccccgccaccaacaccttcgtgggaacgggcgacaacacctcaacaggctccgac
caatattcggattacagctacaaggccaacccccccaaatacagcagcaaacaggtagga
gactacgcaaacacgtaccaaagggacatctattggaccaaccgggtgtggtag
DBGET
integrated database retrieval system
