Notothenia coriiceps (black rockcod): 104943239
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Entry
104943239 CDS
T04920
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104943239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104943239
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104943239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
104943239
NCBI-ProteinID:
XP_010766887
UniProt:
A0A6I9MR62
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MPVKRERMRQWLEKQIELCTVSGLSWVDKDSKMFSIPWKHAARHGWEMDKDACLFKKWAL
HTGKYIEGQACDPKTWKANFRCAMNSLPDIEEVKDKSINKGHQAVRVFRMLPVCPKSRVK
RSKTTQTKSRTKNAIKMEEDSISTEPSSTQENNVDSTVKNEQTDFSFLNPSEVPDWSVSF
EIDSSFPNTFCHRFEVSPEHSSDYNSTEDIINICQKLEQESWPTFPSDSIGFLSDEAYAS
PGSQWSESSSADEIEETPSYTTLGSTYTNRTDDLWSPFL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccggtaaaaagggagaggatgaggcaatggctggagaaacagatcgagttatgtacc
gtctcgggtctcagctgggtggataaggattcgaaaatgttttcaattccctggaaacat
gcagcccgacacggctgggagatggataaggacgcatgcctgttcaaaaaatgggcactc
cacacaggaaaatacattgaaggtcaagcctgtgaccccaagacatggaaagccaacttc
cgctgtgcaatgaactcactgcctgacatcgaggaggtgaaagacaagagcatcaacaaa
ggccaccaagctgtgcgtgtcttcaggatgctgcctgtgtgccccaaatctagagttaaa
cgaagcaagacaacgcaaacaaagtccagaacgaagaacgcgatcaagatggaggaagac
tcaatcagtacagagccttcgtccactcaggagaacaatgtggacagcacagtgaaaaat
gagcagacagatttttcattcctgaatccatctgaagttcctgattggtctgtgtcattt
gaaatcgactccagctttccaaacaccttctgccacagatttgaagtttcacctgagcac
agctccgattacaactcaacagaagatatcatcaatatttgccaaaaactggagcaagaa
tcctggccgacattcccttcagacagcattgggttcctgagcgatgaagcatacgccagt
ccaggaagccagtggagtgaatcctcctcagccgacgagatagaagaaaccccaagctat
accacattgggctcaacctacacaaatcgcacagacgacctctggtccccattcctgtaa
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