Notothenia coriiceps (black rockcod): 104943327
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Entry
104943327 CDS
T04920
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C-like
KO
K22038
volume-regulated anion channel
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104943327
Ion channels [BR:
ncc04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
104943327
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_At5g56370
LRR_9
LRR_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
104943327
NCBI-ProteinID:
XP_010766990
UniProt:
A0A6I9MZC3
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MIPVGEFKNFGVDQNSKYRVLKPWWDVFSEYLCVAMLMLGVFGCTLQLTQDKIACLPSHF
TSPTPEAIDCSHLGSYRENETSMQTLVKPTKPILQEVSGRKNNLDIHQYVFVNHYCYERF
VHWYAKYFPYLVVIHTMIFMVASSFWFKFPGTSSKIDIFVTILGKCFDSPWTTRALSEVS
EERGEEKLVNWRRNTMSKDPPERRADDDETVVLLRSASVKSNPEKKNMEPQSAASVLDKK
EGEQAKALFEKVKKFRTHVEEADILYVMYVLQTSLKVFKFLIIIIYTAVLVPKIEIVVRC
YVPPELTGFDIFCCNHNKAHLFSKLAYCYICFVGVFGLLCIYTLYWQFHRPLKEYSFEQV
RLETGINDIPDVKNDFAFLLHLVDQYDALYSKRFAVFLSEVSESHLYQLNLNYEWTAKKL
RSRLTKNAKNQLELHLLMLPGLPDTVFEITEMESLKLEQVKNVTIPASVAKLESLRELSL
IFCPAKLHLPALNHLKAHLKVLCLDFESLDEIPMWMYTLQSLEELHLNGPLTNELSKSAS
LDSLRELRALRVLSLRSNLTKIPPSVVDVALQLQHLCIYNEGVKLQAFSSLKKLTNIVSL
ELVGCELERIPSAVFSLNNLQELDLKENKLSTVEEILSLQHCHRLVTLKLWHNKIAYIPE
HISKLHTLEMLDISWNKLRKLPSRLFYCTKLRHLDVSHNQLTSLPPEVGILQGLQFFSAA
FNSLETLPEELFSCKRLKTLALGNNCLSYLSSRVSSLVQLVRLEVKGNRLESLPVEIGEC
PLLSLSGLIAEDNLLDLMPSDVRSKLTSSS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtgggtgaattcaaaaactttggcgtagatcagaactcaaagtatcgtgtc
ctgaagccgtggtgggatgttttctcagagtacctgtgcgttgctatgcttatgcttgga
gtctttgggtgcaccttgcagctcactcaagacaagattgcatgcctgcctagccacttc
accagcccgacgcctgaagccatagactgcagccacctcgggagctacagggagaacgag
acatccatgcagacgctcgtcaaacctacgaagcccatcctccaggaagtgtccggtcgc
aaaaacaacctggacatccaccagtatgtgtttgtcaaccactactgctacgagaggttc
gtccactggtacgcaaagtacttcccatacctcgttgtgatccacaccatgatcttcatg
gtcgcaagcagcttctggttcaagttccctgggacatcttccaagattgacatctttgtt
accatccttgggaagtgctttgattctccctggaccacgagagccctgagtgaggtttct
gaggaaaggggagaggagaaactggtgaattggagaaggaacaccatgtcaaaagatccc
ccagaacgacgagcagatgatgatgagactgtggtgcttcttcgctccgcctctgtcaag
tcgaatccagaaaagaaaaacatggagccccagtcggcagcctctgtcttggataagaag
gaaggagagcaggccaaagctctgtttgaaaaggtgaagaagttcaggactcatgtagag
gaagcagacatcttgtatgtcatgtatgtgctacaaacgtcacttaaagtcttcaagttt
ctaataatcatcatctacactgcagtgctggtaccaaaaattgagatcgtagtgcgctgt
tatgttcctcccgagctgactgggtttgatatcttttgctgtaaccacaacaaagcccat
cttttctccaagcttgcttactgctatatctgctttgtgggcgtgtttggacttctctgc
atctacacgctgtactggcagttccacagacctctgaaggagtactcctttgagcaggtc
cgcctggagacgggcattaacgacataccggacgtgaagaatgactttgcgttcctcctg
caccttgtggaccaatatgatgctctttactctaaaaggtttgccgtctttctgtctgag
gtcagcgagagccatctctatcagttaaacctcaactacgagtggaccgccaaaaagctg
cgttcacgcctcaccaagaacgccaaaaaccagttggagctccacctgttaatgttgccg
ggtctcccagacaccgtctttgagattactgaaatggaatcactcaaactggagcaggtt
aaaaacgtcaccatcccagctagtgtggcaaagcttgaatctctgcgggagttatcgctg
atcttctgccctgcaaagcttcatctgccggccctcaaccacctcaaggcgcatttaaag
gtcctgtgtctagattttgaaagtttagacgagattcctatgtggatgtacaccctgcag
agcttggaagagttacatctgaatggtcctttaaccaatgagttgtccaaaagtgcctct
ctggattcccttcgagagctcagagctctgagagtcctttctctccgctccaacctcact
aagatccctcccagcgtagtggatgttgcattacagctgcagcatctgtgcatctacaac
gaaggtgtcaagctccaagcctttagcagcttgaagaagttaaccaacatagtctccttg
gagttagtgggctgcgagttggagcgcatcccaagtgccgtcttcagtttgaacaatctg
caggagttggacctgaaggaaaacaaactttccactgtggaggagattttgagcttgcag
cactgccaccgtttagtgacactaaaactgtggcacaacaaaattgcttacatccctgaa
catatcagtaagctgcacaccctggagatgctcgacatcagctggaacaagctccgaaag
cttccctctcggctgttttactgcaccaaactcaggcacctcgatgtctcccacaaccag
ctcacctctctccctcccgaggtgggcatcctgcagggccttcagttcttctccgctgcc
ttcaactctttagagacgctgccagaggagctgttctcctgcaagaggcttaagaccttg
gctcttggaaacaactgcctgtcgtatctcagctctagagtttccagcctggtccagctg
gtacggctggaggttaaagggaaccgtctggagtctctacctgtggagataggggagtgt
cccctgctaagtctcagtggactgattgcggaggacaacctactggatctgatgccttca
gatgtgcggagcaagttgacttcttctagttga
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