Notothenia coriiceps (black rockcod): 104943335
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Entry
104943335 CDS
T04920
Name
(RefSeq) nephrocystin-3-like
KO
K19360
nephrocystin-3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncc03037
]
104943335
Cilium and associated proteins [BR:
ncc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104943335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3
NPHP3_hel
TPR_12
TPR_10
TPR_1
TPR_7
TPR_8
TPR_MalT
TPR_2
TPR_16
HAT_Syf1_CNRKL1_C
TPR_19
ARM_TT21_C
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
104943335
NCBI-ProteinID:
XP_010767000
UniProt:
A0A6I9MZD0
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MKREVLAREKEILEDHQKTSRQQKEKPGEYESSHGDLGAWPPKLRTGASGAPRDRLLEAL
PDRNPSGGGVQGPSVSEGEESGGWAGDVERTQDWSLLRHGYHRRMRNFCLFHRRHSDTSG
VKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQGIQIYDLNDSDSDDNQTTVTAAGT
QCDYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLIDVEGPFANVGRDDWDAAVASLLQV
SPHVPQALWSNTVRCYLIFTQETKPELDVFIKKHSPVLRKMCEGLGHFYLNVCFPEENAA
SYDVERKQEIERSSVCVLLVKSTVTSSVVEDCEEAFVKNPDGHPLVLYLRTEEDHTLTGP
TRQLLERINAADKAAKVKVVDHSGSAEEGADLIYSQLEKVIKQELLCLEGADVDSKDSGI
DEGREEDSGDVLWDLHDEQEQIESYQQACSSTSSQLGFQKVGLWPTLHLDPLSPREVRSV
VNAECQSMELKLTKDQEKKLERHCRSASTCNALYVTLLARMIISSISGCPLEKSLEQCLQ
CQDTMSLYRLALKMTLNSLNTDRERHIMREILCLVCSSHNGVSESEVLDLFTELELPVLS
SLLYRLNRLCIVTLRCGLIRFQHLQAWEAVRLEFLGGGSSSAAYREKLIQYFSQQLSPDR
VTWRVADELPWLLQQQDDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMAT
EYFDSLKQYEKSCENEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPD
HPSVARSLHQLAAVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQ
NKYEQAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGTDSADSAKTLNELG
VLYYLQNNLDAAKLFLTRSLETRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYER
ALDIRKRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLDIREKSFGPKHPSVAT
ALVNLAVIYCQLVRRISFSLYHILLTFIILQDFSHSLFE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggaggttctcgcgagagaaaaagagatcctagaagaccatcagaagacgtct
cgacaacagaaggaaaagcccggcgagtatgagtcgtcgcatggagatctaggtgcttgg
ccaccaaaacttcgaaccggggctagtggcgctccgcgagaccgcctcctcgaagcactc
ccggaccgaaacccgagtggaggtggcgtccagggccctagtgtgtccgaaggggaggag
agtggaggatgggcaggagatgtggagaggacccaggactggtccctgctgcgccacggg
taccaccgtcgaatgcgaaatttttgtctttttcaccgtcgtcactcggacacttcaggg
gtcaaacgacagtttaagatcttccgggagaccaaagaaaaagagattcaggatctcctg
cgggccaaaagggacttggaggccaaactgcagcagctacaggctcagggaatccagatc
tatgacttaaatgattctgactcagatgacaaccaaaccactgtcacagctgcagggact
cagtgtgattactggtctggtggggtgctgggaagtgagccctctatgggcagcatgatg
cagttacagcagaccttcagagggcctgaatttgcccacagtttgatagatgtggaggga
ccctttgctaatgtgggcagagatgactgggacgctgccgtggccagtctgcttcaggtg
tcccctcacgtgccccaggccttatggagtaacaccgtgcgctgctacctcatcttcacc
caggagaccaaacctgagctggatgtctttattaagaaacactcacctgtgttacggaag
atgtgcgagggtctcggccatttctacctgaacgtgtgcttcccagaggaaaacgctgcc
tcctacgatgtggagcgaaagcaggagattgaaaggagctctgtgtgtgtgcttctagtc
aaatctactgtaaccagctccgtggtggaggattgtgaggaggcttttgtgaagaatcca
gacggccatccactggtgctctacctcaggactgaagaagaccacactctgaccggaccc
accagacaactgctagagagaatcaacgctgcagacaaggcggctaaagtcaaggtggtg
gatcacagtggctctgcagaggagggggctgacctcatttattctcaactggagaaagtc
atcaaacaggagctgctgtgtcttgaaggagcagatgttgactctaaggactctgggata
gatgaggggcgtgaggaggactcgggagacgtgctgtgggacctgcatgacgagcaggag
cagattgagtcctaccagcaggcctgcagcagcacctcctcccagctgggcttccagaag
gtggggttgtggcccactctacacctggaccctctgagtcccagagaggtgaggagcgtt
gtgaatgcagagtgccagagcatggaactcaaactaaccaaggaccaggagaagaagctg
gagaggcactgccgctctgcctccacctgcaacgcattgtatgtcacactgctggcaaga
atgatcatcagcagtatatccggttgccctctggagaagagcctggagcagtgtctgcag
tgtcaggacaccatgtctctgtaccgcctggctctcaagatgacgctgaactccctcaac
acagacagggagcgacacatcatgagagagatcctatgcctcgtctgttctagccataat
ggagtgagtgagtccgaggtgttagatcttttcacagagctggagctgccggtcctgtcc
tctctgctgtaccgcctgaacagactctgcatcgtgaccctgcgctgcggcctcatcagg
tttcaacacctgcaggcttgggaagctgtaaggttggagttcctgggaggaggaagtagc
tcggctgcttacagagagaaactcattcagtacttcagtcagcagctcagcccggaccgt
gtgacgtggcgtgttgcagacgagctgccctggctgctccaacagcaggacgatcggacc
aaactacagctcagcctcctcaacctgtttgtctcccagaacctgtacaagaggggtcat
ttctccgagctgctagcctattggcagtatgtgggcaaagacaagagctccatggccacg
gagtactttgactccctgaaacaatatgagaagagctgtgagaatgaagacagcatgacc
aagctggccaacctgtacgagactttgggacgtttcctcaaagacctcggtctccccagt
caggctgtagcacctttacaaaggtccctggagatcagggagacggccttggacccggac
caccccagcgtggctcgctcgctgcaccagctggccgcggtttacgttcagtggaagaag
tacggcaacgctgagcagctgtacaagcaggcgctggagatcagtgagaacgcctacgga
gccgagcacgccagcgtagcacgagagctggagtccctcgccatgctctaccagaaacag
aacaagtacgaacaagcagagaaactgaggaagaggtcagtaaagatccgccagaagact
gctcgccagaaaggccatatgtacggcttcactctgctgaggcgcagagctctgcagctg
gaggagctcactctgggaacagactctgcagactctgccaagacactcaatgaactgggt
gttctgtactacctccaaaacaacctggatgctgctaagctgttcctgacccgctctctg
gagacccgtcagcgcgtcctcggtccggaccaccctgactgcgctcagtccctcaacaac
ctggccgctctgcacacggagaggcgggagtacgagacggccgaggacatgtatgagaga
gcgctggacatccggaagagggctttatccccggaccacccgtcgctggcatacactctc
aaacacctggccatgctctacaaacgcagagggaagctggagaaggccgtgccgctgtat
gagctgtctctggacatcagggaaaagagttttgggcccaaacatcccagtgtggccaca
gcactggtcaacctggctgtgatctactgccaactggtgaggaggatttcatttagcctg
taccacatattactgactttcataattcttcaggacttttcacactcgttatttgaatga
DBGET
integrated database retrieval system
