Notothenia coriiceps (black rockcod): 104943798
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Entry
104943798 CDS
T04920
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4-like
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104943798
04082 Neuroactive ligand signaling
104943798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104943798
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
104943798
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
104943798
NCBI-ProteinID:
XP_010767565
UniProt:
A0A6I9N0T1
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MMTTNVWVKQEWDDYKLSWNPEEYENVTSIRIPSEIIWRPDIVLYNNADGDFAVTHLTKA
HLFHDGRIKWMPPAIYKSSCSIDVTFFPFDQQSCKMKFGSWTYDRSKIDLISMASDVDQM
DYWESGEWVIINAVGKYNTKKYECCMEIYADITYYFIIRRLPLFYTINLIIPCLLISCLT
VLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMVFVTLSI
VITVFVLNVHHRSPQTHGMPHWVRRVFLDMVPRVLFMKRPPGTAKQNCKKLIEMMHRPTT
ISATGNSLAYWTGLETGFRQMSQVNDTLPKTPSDSPSIHVCSPSPPSSPLENHNGNDHPM
KANLFSRPGSGQYSVLSEKQPLRVLNSAASSSSHTSLPLTLPMCPLRSLSREEIHTMAPN
GRSHSAEQMSDQQKELPQKAGHRCRSSSFQYCCLHDEGPGIMGIAGWVKKQPATDQPTEP
LRVEPVKDVCSQQTLGLIISPAMQRAIEGVQYVADHLRAEDEDFSVKEDWKYVAMVIDRI
FLWMFVLVCILGSVGLFLPPWLAGMI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccacaaatgtctgggtcaagcaagaatgggatgattacaaactcagctggaac
ccggaggaatacgaaaacgtcacctccatccggattccctcagaaatcatctggaggcca
gacattgtcctctacaacaacgctgatggcgactttgcggtaactcacctcacgaaggcc
cacctgttccatgatggtcggataaagtggatgccaccggccatttacaagtcttcgtgc
agcatagacgtcacatttttcccatttgaccagcaaagctgcaagatgaagtttgggtcg
tggacctacgaccgctccaagatcgatctgatcagcatggccagcgatgtggatcagatg
gactactgggaaagcggggagtgggtcattatcaatgcagtgggcaagtacaataccaaa
aagtacgagtgctgcatggagatctacgcggacatcacttactacttcataatccggagg
cttccgttgttctacaccattaacctcatcatcccctgtcttcttatctcctgtttgact
gtgctggtgttttatttgccatcgcaatgcggagagaagatcaccttgtgtatctccgtc
ttactgtccctaactgtattcctcctgctgatcacagagattataccatccacatcgctg
gtgattccattaattggggaataccttctgttcaccatggtctttgtcacgctttccatc
gtaattactgtctttgtgttaaacgttcatcaccggtccccacaaacccacggcatgcct
cattgggtgcggagagtattcttggacatggtgcctcgagtcctcttcatgaagcgtccg
cctggcaccgccaagcagaactgcaagaagctcatcgagatgatgcaccgtccaaccacc
atatctgcaacgggcaactctctggcctattggacagggttagagacggggttcagacag
atgagccaggtaaacgatacccttccaaagactccatccgacagtccaagcatccatgtg
tgctcaccctccccaccctcttcccctcttgagaaccacaacgggaatgatcacccaatg
aaggccaaccttttctcccgccctggatctggacagtattcggttctctctgagaaacaa
cccctacgggttctcaactctgccgcctcgtcttcttcccatacgtccttaccccttact
ttaccaatgtgcccactccgtagcctatccagggaagaaatacacacaatggccccaaat
ggtcgttcccacagcgcagagcagatgtctgaccaacagaaggagcttcctcagaaagct
ggccatcgatgtcgctcaagcagcttccagtactgctgcctgcacgatgaaggaccagga
atcatgggaatcgcaggctgggtgaagaaacagcctgccacagatcaaccaacagaaccc
ctcagagtggagcccgttaaagacgtgtgtagccaacagaccctgggtctgatcatttcc
ccagccatgcagcgggccatagagggagttcagtacgtcgctgatcatctcagggcagag
gatgaagatttttcagtgaaagaggactggaagtatgtggccatggtcattgacaggata
ttcctctggatgtttgtcctggtgtgtatactgggatctgttggactcttccttcctcct
tggctggctggaatgatctag
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