KEGG   Notothenia coriiceps (black rockcod): 104943882
Entry
104943882         CDS       T04920                                 
Name
(RefSeq) transcription elongation factor B polypeptide 2-like
  KO
K03873  elongin-B
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104943882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104943882
   03400 DNA repair and recombination proteins [BR:ncc03400]
    104943882
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     104943882
   Cul5 complex
     104943882
DNA repair and recombination proteins [BR:ncc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104943882
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 104943882
NCBI-ProteinID: XP_010767651
UniProt: A0A6I9N079
LinkDB
Position
Unknown
AA seq 119 aa
MDVFLMIRRNKTTIFTDAKESTTVYELKRIVEGVLKRPPEDQKLYKDDVMLNDSQTLGNC
GFTNQTARPQAPATVGLAFRLSDDSFEQLRLESFSTPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgtttcttatgatccgacgtaacaagacaaccatcttcacagatgccaaagag
tcaaccacagtctatgaactcaagcgcattgtggaaggcgttttaaagaggccacctgaa
gatcagaaactttacaaggatgacgtgatgctcaatgacagtcaaactcttgggaactgt
ggctttacgaatcaaacagcccgacctcaggccccagcaacggtgggattagccttccgt
ctgagtgatgattcatttgagcagctgaggctcgagtctttctccactcccccagagctc
cctgacgtcatgaagccccaggactcgggcagcacagccaacgagcaggctgtacagtga

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