Notothenia coriiceps (black rockcod): 104944203
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Entry
104944203 CDS
T04920
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104944203
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104944203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104944203
NCBI-ProteinID:
XP_010768009
UniProt:
A0A6I9MP10
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MYSIMMETDLHSPMVPQTNPSNPGGGGGKVPQDRIKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLGSHPGIGMVGGGQRLDSPGGGGHGGGNAGYASHVNGWANGAYSGQVAAAAAAAH
AMMQEAQLYTQHPGSGAHHHAHHHPHHHHPHNPHRYDMSALSYSPISNSQSYMSASPPGY
GGITGYSHQSSGVSPVPLGSLVKSEPSVSPPVSTARPPQQCPTGDLRDMISMYLPTGEAA
GDSSVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttacattcccccatggtcccgcagaccaaccca
tccaacccggggggaggaggaggcaaagtcccgcaggacagaatcaagagacccatgaac
gccttcatggtgtggtcccggggccagaggaggaaaatggcccaggagaacccaaaaatg
cacaactccgagatcagtaagagactcggcgcggagtggaaagtgatgaccgaggcggag
aagaggccgtttattgacgaggcgaagcggctccgggccatgcacatgaaggaacacccg
gactacaagtaccggccgcggaggaagaccaagacgctgctgaagaaggacaagtactct
ctggccggggggctcctcggatcacacccggggattggcatggtgggcggcgggcagcgg
ctggatagccctggaggagggggtcacggaggtgggaatgccggctacgcctcgcatgtg
aacggctgggcgaacggtgcgtactcgggccaggtggcggctgcagcggcggcggcgcac
gccatgatgcaggaggcgcagctgtacacacaacacccgggctccggagctcaccatcac
gcgcaccatcacccgcaccaccatcacccacacaacccgcaccggtacgacatgagcgcc
ttgtcctacagccccatctcaaactctcaaagctacatgagcgcctccccgccgggatac
ggggggatcaccggatactcgcaccagagctccggtgtgtccccggtgcctctgggctcc
ctggtgaaatctgagcccagtgtgagccctccggtgtccacagcgcgcccaccgcagcag
tgccccaccggggacctgcgggacatgatcagcatgtacctgcccaccggagaggcggcg
ggggactcctccgttcacagcagactgcacgtgctccacccgcagcactaccagagcagc
ggctccactccggtaaacgggacagttcctctgactcatatttaa
DBGET
integrated database retrieval system