KEGG   Notothenia coriiceps (black rockcod): 104944203
Entry
104944203         CDS       T04920                                 
Name
(RefSeq) transcription factor Sox-1a-like
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncc03000]
    104944203
Transcription factors [BR:ncc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    104944203
SSDB
Motif
Pfam: HMG_box SOXp HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 104944203
NCBI-ProteinID: XP_010768009
UniProt: A0A6I9MP10
LinkDB
Position
Unknown
AA seq 334 aa
MYSIMMETDLHSPMVPQTNPSNPGGGGGKVPQDRIKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLGSHPGIGMVGGGQRLDSPGGGGHGGGNAGYASHVNGWANGAYSGQVAAAAAAAH
AMMQEAQLYTQHPGSGAHHHAHHHPHHHHPHNPHRYDMSALSYSPISNSQSYMSASPPGY
GGITGYSHQSSGVSPVPLGSLVKSEPSVSPPVSTARPPQQCPTGDLRDMISMYLPTGEAA
GDSSVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgtacagcatcatgatggagacggacttacattcccccatggtcccgcagaccaaccca
tccaacccggggggaggaggaggcaaagtcccgcaggacagaatcaagagacccatgaac
gccttcatggtgtggtcccggggccagaggaggaaaatggcccaggagaacccaaaaatg
cacaactccgagatcagtaagagactcggcgcggagtggaaagtgatgaccgaggcggag
aagaggccgtttattgacgaggcgaagcggctccgggccatgcacatgaaggaacacccg
gactacaagtaccggccgcggaggaagaccaagacgctgctgaagaaggacaagtactct
ctggccggggggctcctcggatcacacccggggattggcatggtgggcggcgggcagcgg
ctggatagccctggaggagggggtcacggaggtgggaatgccggctacgcctcgcatgtg
aacggctgggcgaacggtgcgtactcgggccaggtggcggctgcagcggcggcggcgcac
gccatgatgcaggaggcgcagctgtacacacaacacccgggctccggagctcaccatcac
gcgcaccatcacccgcaccaccatcacccacacaacccgcaccggtacgacatgagcgcc
ttgtcctacagccccatctcaaactctcaaagctacatgagcgcctccccgccgggatac
ggggggatcaccggatactcgcaccagagctccggtgtgtccccggtgcctctgggctcc
ctggtgaaatctgagcccagtgtgagccctccggtgtccacagcgcgcccaccgcagcag
tgccccaccggggacctgcgggacatgatcagcatgtacctgcccaccggagaggcggcg
ggggactcctccgttcacagcagactgcacgtgctccacccgcagcactaccagagcagc
ggctccactccggtaaacgggacagttcctctgactcatatttaa

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