Notothenia coriiceps (black rockcod): 104944237
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Entry
104944237 CDS
T04920
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104944237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104944237
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Serotonin (5-HT3)
104944237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
AZUL
Motif
Other DBs
NCBI-GeneID:
104944237
NCBI-ProteinID:
XP_010768048
UniProt:
A0A6I9MXN5
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MLRFVRNWKALFLLSLLTVGCGDAVCTSRRCLAEMLIKKGLLSQPQTDYCSNVIRVPFIE
YQTLAVNTKDLRLISRLQADIVWLDPELKWNTSEYNYEYVVLPVGKVWTPEILVTNGIVS
TMKHRSKDLIVQSDGILRHSVIINAEVNCEVNLFNYPFAFDSCPVAIQSWSDGGCGSYLI
LERVYSADGSQGDWKTESVEIQNLTDVRQYILVNLSIKPTNPFVTLLMPSLLILLADMVS
FALPLEGGERNGFKVTLVLSFTVFLNILNDILPGDSSCSPIIRTHFCICLVLLVFSMLVS
LVLTRLARDGGLIFCCGSKGTVPDNTEVKADVSVVQISSPEEDGRMLKRVVNFLEAVDAD
TLKKDRHLKFANNLDKAFFWFYSIGGTVYFIAMITVMVKYRCVVNHFEFWY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttaagatttgtgagaaactggaaagctctcttcttactgagtttactaacagtagga
tgtggagatgcagtctgcacaagtcgccgatgtctggctgaaatgttgatcaaaaaaggc
cttctatcacagccacagactgattactgcagcaatgtgatcagagtgccgttcattgag
taccagactctggcagttaacacaaaggatctgcgcctcatcagtcgtctgcaagcagac
attgtatggttggatcctgagttgaaatggaacacatcagaatacaattatgaatacgtg
gtcctgccagttggaaaagtctggaccccagagatccttgtaacaaatggaatagtatca
actatgaagcacagatccaaggatctgattgtacagagtgatggcatactgaggcactct
gtgatcattaacgcagaggtgaactgtgaagtcaacctcttcaactatccattcgctttt
gattcttgtccagtcgccatacaatcgtggtccgatggcggttgtggttcttacctgata
ttagagagagtttatagtgctgatggtagccagggagattggaaaactgaatctgtggaa
attcagaatttaactgatgtccgtcaatacatcttggtgaatttaagtatcaaacctacc
aacccctttgtaacattactgatgcccagtcttctgatcctcttggctgatatggtcagc
ttcgctctgccgctggaaggtggtgaacgcaacggtttcaaggtcacgctggtgctcagc
ttcaccgtgttcctcaacatcctcaacgatatacttcctggagacagctcttgcagcccc
atcatccgaacccacttctgcatttgtctggtgctcctggtgtttagcatgctggtgtcc
ctggtgctgacacgcttggccagagacggtggtctcatattctgctgcggctccaaaggg
acagtccccgacaacacagaagtcaaagctgacgttagtgtggttcagattagcagccca
gaggaggatggtagaatgctgaaaagggtggtcaacttcctggaggctgttgacgcagac
acactgaaaaaggacagacatttgaagtttgccaacaatttggacaaggcatttttctgg
ttctattcaataggcggaactgtgtactttattgccatgataactgttatggtaaagtat
agatgtgtggttaaccattttgaattctggtattaa
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