Notothenia coriiceps (black rockcod): 104944322
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Entry
104944322 CDS
T04920
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104944322
04131 Membrane trafficking [BR:
ncc04131
]
104944322
03036 Chromosome and associated proteins [BR:
ncc03036
]
104944322
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104944322
Membrane trafficking [BR:
ncc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
104944322
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
104944322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
UBA2_C
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
104944322
NCBI-ProteinID:
XP_010768142
UniProt:
A0A6I9MUS5
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MDIHCKADPFSAMHLSHAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDR
LLAEAVCDNDTVPSVSSINRIIRTKVQQQFHPSPDGSVTPLSTPGHTIVPSTASPPVSSA
SNDPVGSYSINGILGIPRSNGEKRKRDEVHWSGNHMDGRKIGHYGSDGSGPGSDSQGSVE
SLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTPEHIKPEQANEYSHPSLNGGHDDVKP
SLSSSASSDLASSVSQSYSVVTDSHPSYPPSICLKREPHEASFAPFTPSSTPSYPAHTHG
PRYSQYARQPFIAGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGGDFSGNPYSHPQ
YTTYNDGWRFSNPALLMPRPVAPHHPLLPRPTTATSYYGDHLKLQGQGYGLHIVHV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctcggcgatgcacttgtcccacgcagggcac
ggcggtgtgaaccagctcggcggggtgtttgtgaacggcaggcccctcccggacgtcgtg
aggcagcggatcgtggagctggcccaccagggggtccggccctgcgacatctccagacag
ctacgggtcagtcacggctgtgtcagcaaaatcctcggcaggtactatgaaaccggcagt
attaaacccggagtcattggaggctccaaaccaaaggttgcaactccgaaagtggtggat
aaaatagctgactataagcgccagaacccaaccatgttcgcttgggagataagggaccga
ctactggctgaggccgtctgcgacaacgataccgtccccagcgtttcatccatcaacagg
attatccgcaccaaagtccagcagcaattccacccgtcccccgacggatccgtgacgccg
ctctccacgcccggccacaccatagtgcccagcacagcttctccccctgtgtccagcgcc
tccaacgatccagtaggttcctactccatcaacggcattctgggtatccctcgctccaac
ggcgagaagaggaaacgagatgaagttcactggagtggcaaccacatggatggaaggaaa
ataggacattatggctctgatggctcaggccccggcagcgactctcagggcagcgtggag
agtttaaggaagcacctgcgggcggacgccttcacccagcagcagctggaggccctggac
cgtgtgttcgaacgtccttcttaccctgatgtcttccccaccccagaacacatcaaacct
gaacaggcgaatgaatactcacacccatccctgaacggcggccatgatgacgtgaagccg
agcctctcctccagcgccagctctgacctcgcctccagtgtctcccagagctactctgtt
gtgacagactctcacccatcatatccaccttccatatgcctaaagcgagagccccatgag
gcatcatttgcccccttcaccccctcctctactcccagctaccctgcccatacccacggc
ccccgctacagccaatatgcccgccagccttttatagcaggtcgagacatggccagtacc
accctacctggctacccgcctcacgtcccccccactgggcaaggcagctaccccacctcc
acactcgctggaatggttcctggaggggacttttctggaaacccttactctcatccacaa
tacaccacatacaacgatggatggcggttcagcaatccagcattactaatgccgcgtccc
gtggctccgcaccacccactgctgccacggcctacgaccgccactagttactatggagac
catctcaaactgcagggccagggatatggcctccatattgtccatgtctga
DBGET
integrated database retrieval system
