KEGG   Notothenia coriiceps (black rockcod): 104944426
Entry
104944426         CDS       T04920                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04510  Focal adhesion
ncc04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104944426 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104944426 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ncc00535]
    104944426 (chad)
Proteoglycans [BR:ncc00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    104944426 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_9 LRR_14 LRR_LRWD1 LRRCT
Other DBs
NCBI-GeneID: 104944426
NCBI-ProteinID: XP_010768255
UniProt: A0A6I9N2M5
LinkDB
Position
Unknown
AA seq 367 aa
MRCVSWLLFGTSILVLGLAVQGAPGQCPNLCHCHGDLQHVICDSVGLKKIPRVSEVTRLL
NLQRNSLGSIPTGAFTNSRGLISLHMQQCQLREIGSQAFKGLKKLIYLYLSNNQISSLKP
GAFNDLTELTYLYLDGNQISDLAKGVFSPMINLFILQLDDNRLRELRPGTFTGAKNLRWL
HMSGNELTTLQPGSLDEVENLAIFHLERNRLSTYPIAAMSKLRVVEELTLGKNPMKTIPD
IAFQSFGRYMEKLHLDNMGLEKFSDGAFTGVTAIKTLNLDNNKLKFLPKSLNLSSIAITN
LTLTNNPWGCTCQLAPLRRWMDSSRNRPEAVCASPPQQKGKQVIDSTALSGCKVKSKKNK
KGRRNSQ
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcgttgtgtgagctggttgctgtttgggacctccatcctggtcctgggcctcgcggtg
cagggagccccgggccagtgcccaaacctgtgccactgccacggggaccttcagcacgtg
atctgtgacagcgtggggctgaagaagatcccccgggtgtctgaggtcacccgcctgctg
aacctgcagaggaacagcctgggcagcatccccacaggggccttcaccaacagcaggggc
ctcatctctctgcacatgcagcaatgccagctgagggagatcgggtcccaggccttcaag
gggctgaagaagctcatctacctctacctgtccaacaaccagatcagcagcctcaagccc
ggcgccttcaatgacctgacggagctcacctacctctacctggatgggaatcagatcagc
gacctcgccaagggcgtcttctcccccatgatcaacctcttcatcctgcagctggacgac
aaccggctccgggagctgcgcccggggacctttacgggggccaaaaacctgcgctggctg
cacatgagcgggaacgagctgaccacgctgcagccaggctctctggacgaggtggagaat
ctggctatattccacctggagaggaacaggctgtccacctatcccatcgcggcgatgagc
aaactgcgggtggtggaggaactgacgctggggaagaaccccatgaagaccatcccagac
atcgccttccagagctttggtcgctacatggagaagctacacctggacaacatggggctg
gagaagttctctgacggtgcgttcactggtgtgactgcaatcaagacactgaacctggac
aacaacaagctaaagttccttcccaaaagcctgaatttaagcagcatcgccatcaccaac
ctgaccctcactaacaacccgtggggctgcacgtgccagctagctccattgcggaggtgg
atggactctagtcgcaatcgtccagaggcagtgtgtgcatctccccctcagcagaaagga
aagcaagtgatagacagcaccgccttgagtggctgcaaagtcaagtcaaagaaaaacaaa
aagggccgacgtaactcgcagtag

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