Notothenia coriiceps (black rockcod): 104944584
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Entry
104944584 CDS
T04920
Symbol
impg2
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2 isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncc00536
]
104944584 (impg2)
Glycosaminoglycan binding proteins [BR:
ncc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104944584 (impg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
Reovirus_L2_8th
EGF
Motif
Other DBs
NCBI-GeneID:
104944584
NCBI-ProteinID:
XP_010768442
UniProt:
A0A6I9MVM6
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MQEQVVELSIVLPGKSYSNDLENPTSSQYQTLSRQLAQKIEDALKGLPGFKSVSVKDFRP
QKDDEGGGVVVDYAVTVVVDGSGVSLEQLDYLTLQSNRVENSYREVMELPTVVYAISEVK
DIITDALHNNELDTVKTSGGQSSSAVSEFPAAADGDTNTAADEPPEVTILEEDVEDVEDV
DKVGVLPDVSETNRVENNENDIIILEESAAVSPDSVNTDSELEADSIAEEGLLLGDIVQT
PAVETPAAEELPAELSEVTLHEPPVDEEASGVGTDDLNNLLEPPTTTEEEEEAESLEETD
QEDGLITEDVAINSEIPEDNEMSSIAAETTEEEEEGLSVLVSPPETEEEATEAPEPLAEE
TGEESVEQPEEQLEEQLEEQLEEQPEEQPEEQPEEQPEEQPEEQPEEQPEEQPEEQPKEQ
LEEQPEEQLEEQPAEQPQEQLEEQPKEQPEEQLEEQPAEQRKEQLEEQPEEQPEEQLEEQ
PKEQPSEKPEEQPEEQPAEEEDNNVVLTIPEEPVAEEVVVEEATENEVEEAAPEAPPVEE
EGPEAPELSTEDLTEDEIVLVNVDEPEPLVTDSLNPVQPTALSPEKESPFTRISDIDTAL
EEQPDIIVPSLVEIQTTDGGLEGATNGDSDYDVIHYGYELINHTEEGSTGFPFGAHGTDQ
VSIAMPVNPGRALMVFFSLRVTNMIFSEDLFNKKSPEYKALEQRFIELLVPYLQSNLSNF
ENLEILNFRNGSIVVNSRMKFGKPVPQTVTTTVYLILEDFCNTAYQTMNLAIDKYSLDVE
SGDKADPCKFQACNEYAGCKVNKWSGEAECVCNAGYFSVDSLPCQSICDLQTDFCLNDGK
CDIIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASGVIFFLART
LRDQYDKDESEDPIRRAESVPSLERATKYNPMYESEATTGYNHYYRRYPEAAVYSSASAE
ASTDFSSEEIRHIYENSELTKEEIQDRIRIIELYAKDRQFADFVRHHQAVVDTRRESSSV
HT
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcaggtggtggagctgagcatcgtcctgcccggaaaatcgtacagcaacgac
ctggagaatccgaccagctcccagtaccaaacactcagcagacagctcgctcaaaagatt
gaggatgctctgaaggggcttcctggatttaagagtgtgtctgtgaaggacttcaggcct
cagaaggacgacgaagggggcggtgtggtggtggactacgctgtcacagtggtggtggat
ggatcaggagtgagcttggaacaactggactacctgacgctgcaatccaaccgggtggag
aactcgtaccgtgaagtcatggagctccccactgtggtgtacgccatcagcgaggtcaaa
gacatcatcactgacgccctgcataacaacgagctggacactgttaagaccagcggaggc
caaagctcgtctgctgtgtctgagttccctgccgctgcagatggagatacgaatactgct
gccgatgagccaccagaggtcacgatcctagaagaggacgtagaggacgtagaggatgtc
gacaaagtcggcgtcctgcctgacgtctccgaaaccaacagagtggagaacaacgaaaac
gacatcattatcctggaggagagtgcagctgtgtctcctgattctgtcaatacagatagt
gaacttgaagctgatagcattgcagaggagggtctgttactcggggacattgtgcagact
cctgcagtagaaacccccgccgcagaggagctcccagccgagctgtcggaggttacactt
catgaacccccagtggatgaagaggcctctggagtgggcacagacgacctgaataacctg
ctcgagccacctacaaccacagaagaagaagaagaagcagagtctcttgaggagactgac
caagaagatgggctgataacggaagatgtcgccatcaattcagaaatcccagaggataat
gagatgtcctcaatcgcagctgagaccacagaggaagaagaagaaggcctgtctgtcctg
gtctcacctcctgagactgaagaggaagcgactgaagcaccagaaccgttggcagaagaa
acaggtgaagaatctgtggaacaaccagaagaacaactagaagaacaactagaagagcaa
ctagaagagcaaccagaagagcaaccagaagaacaaccagaagagcaaccagaagaacaa
ccagaagaacaaccagaagaacaaccagaagaacaaccagaagagcaaccaaaagaacaa
ctagaagagcaaccagaagaacaactagaagagcaacctgcagaacaaccacaagaacaa
ctagaagagcaaccaaaagaacaaccagaagaacaactagaagaacaacctgcagaacaa
cgaaaagaacaactagaagagcaaccagaagagcaaccagaagaacaactagaagagcaa
ccaaaagaacaaccttcagaaaaaccagaagaacaaccagaagaacaacctgcagaagag
gaagacaataatgtggtgctgaccattcctgaggaacctgtggcggaagaagttgtcgtg
gaggaagcaacagagaacgaggtagaagaggctgcacctgaagctcctcctgtggaggaa
gagggcccggaagctccagagctctccacagaggatctgacagaggatgagatcgtactg
gtcaacgttgatgaaccagaaccactagtgacggactctctgaacccggtccaacccact
gccctgtccccagagaaggagtcgcccttcacccgcatctctgatattgacaccgccctg
gaggaacaacctgacatcatcgtcccttcactggtggagatccagaccactgacggaggc
ttggaaggtgccactaatggagacagcgactatgatgtgatccattatggttatgagttg
attaaccacacagaggagggcagcactggctttccgtttggtgcacacggcacggaccaa
gtcagtatcgccatgccagtgaaccccggacgagcactgatggtgttcttcagcctgagg
gtgaccaacatgatcttctcagaggatctctttaataagaaatccccagaatacaaagct
ttggagcaacgattcatagagctgcttgtgccctacctgcagtccaacctgagtaacttt
gagaacctggagatcctgaacttcaggaacgggagcatcgtggttaacagccggatgaaa
ttcggaaaacctgttccacaaaccgttaccaccaccgtctatctgatcctggaggacttc
tgtaacacagcctaccagaccatgaacctggccatcgataagtactcactggacgtagag
tcaggggataaagccgacccctgtaagttccaggcgtgtaacgagtacgctgggtgtaag
gtgaacaagtggtcgggggaggcagagtgtgtctgtaacgcaggatacttcagcgtggac
agcctgccctgtcagagcatctgtgacctgcagactgacttctgcctcaatgacggcaag
tgtgacatcatccccggccagggagcaatctgcaggtgtcgtgtcggggagaactggtgg
tacagaggagagcactgtgaggagtacgtgtctgagccgctggtggtcggcattgcgatt
gcctccgtagctggattcctattggtggcgtccggagtcatcttcttcctcgccaggacg
ttacgggatcagtacgacaaggatgagtcagaggaccccatacggcgagcagagagtgtc
ccgtctctcgagagggcgactaagtacaaccccatgtacgaaagcgaggccaccacaggc
tacaaccactactaccgccgctatcctgaagctgcggtgtacagcagtgccagcgctgag
gcctccactgacttcagcagtgaggagatacgacacatctacgagaacagtgaactgacc
aaggaggaaatccaagacaggatacgcatcattgagctctacgcaaaggaccgacagttt
gcagactttgtacggcatcatcaagctgttgtggacacacgcagagagagctcctctgta
cacacatga
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