Notothenia coriiceps (black rockcod): 104944693
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Entry
104944693 CDS
T04920
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04382
Cornified envelope formation
ncc04510
Focal adhesion
ncc04512
ECM-receptor interaction
ncc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104944693 (lamb3)
04518 Integrin signaling
104944693 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104944693 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104944693 (lamb3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
CEP135_TSGA10_CC
DUF948
CCDC18_1st
DUF1664
LEKR1
CLIP1
Motif
Other DBs
NCBI-GeneID:
104944693
NCBI-ProteinID:
XP_010768568
UniProt:
A0A6I9MZ80
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MRLLLLLAAIAAVSQAQTDCSQGACYPPSNDLLLGRSHKLHASSTCGLTGSEVYCTPYEQ
RRMKCCPCDSTNPNARLAHTVRDVLSTAGPQRWWQSKKEVTPVTLQLDLGNLFQLDNLQL
SFKGPRPNAFVIERTLDDGRGWQPALYLATDCAKSFPGIPTASPLTLEHTYCYTLPPTGA
SSYQDHTIQYSPLRQYAYVPASKSQKIEDVSGVTGLRVRLTELGEVPRLPGRALSRFYAL
KEMRVVGSCMCHGHANRCLPEAYSSPQASSIQVNHQCDCQHHTAGVNCEHCEDLYNDRPW
SPAEEGDTHACQRCECNNHAQRCRFDEAVYEASGRKSGGVCEGCLHHTTGPKCDQCAPGY
QPNPRSHMDRPDACLRCVCSAEGTMNGGRCDDSTGLCQCKVNVEGPRCDRCRRGYYGLST
SDPLGCSKCSCSVDGSLTEVCDPITGQCPCRPHFHGLTCEVCSKGYWKPSLSGRCTPCNC
DPTRSYSDTCDQVTGQCQCRPGFGGRGCAECPDNTYGDALIGCKPCRCDAEGTLPEVCDK
QTGVCLCRPGVTGPRCDSCSRGHCDSFPGCTTCPSCFFTLDAQRQNLSTALGRLSPSIPT
SPAGSGDLGNFGPRIRVLENSLNLIRGSIFLPLNTTTQIDEALSKLDKLRDQVDKVNNEQ
SPKERTPGLGSELDKLQALLDSLTLQYKAKKDAKDNSVSQNNSGAFSTIKNAYNESTDAA
KKVDDSKTPVKESADLRKETNDIRDQIQPANTRDIASRPDLTPAARQVCGSVRSEPCTPL
KCEGEDLCPPEGTPPCKKGEKCVGALPLSKRADADVKDVKERLDRLSGKITDAAEKLQDA
QENTNQVRLTAEKLSNKMKQAREDLEDDLKETRDVVNDLKDFLSDPSSNLTHIQEVSDWI
LKAKLPLSLDALKRKLKELKDLAANLPDSTAVLKEAEPQLETARKLLQEAKDARDTALGV
KDGVDDLLEGIVSEEGSLADLDVKLQNSMDLIENLSDNLNKTKEQLIPADKTLDDVSKLI
KPMKPQLDELKELLKNGGQLAEDAQEDAEKAQDEADAAEEDLVPLEEKLQQLKEKAAAKG
PEGGAGPVGDRLAKLKQDAGELANTTNTMTEALEGKAESLRSLQDEILQKSSQLEGLDVK
LKDLLEKLRRKSAICHG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagactacttttacttttagctgccatagctgcagtatcacaggcccagactgactgc
tctcaaggggcttgttacccccccagcaatgacctcctgctgggccggtctcacaagctc
catgcctcctccacctgcggcctgacgggctccgaggtgtactgcaccccatacgaacag
aggaggatgaagtgttgtccatgtgactccaccaacccaaacgctcggctggcccacact
gtccgggatgtcctgtccaccgccggaccgcagagatggtggcagtccaagaaagaggtg
accccggtgaccctccagttggacctgggcaatctgttccagctggacaacctgcagctc
agctttaagggtcctcgtcccaatgcctttgttatagagaggactctggatgacggcaga
gggtggcagcctgccctgtacctggctacagactgtgcaaaatcttttcctggcatcccc
acagcaagtcctctgactttggagcacacatactgctacacactgccccctactggagca
agctcatatcaagatcacaccatccaatacagtcctttgcgtcagtatgcctatgttcca
gcttccaaaagccaaaagattgaagatgtgtcgggggtgacggggctgagggtgaggctc
acagagctgggcgaggtcccccggctgccaggcagagcgctcagcaggttctacgccctg
aaggagatgagggtggtgggcagctgcatgtgccacggacacgccaaccggtgcctgcca
gaggcctacagcagcccgcaggccagcagcatacaggtgaatcatcagtgtgactgccag
catcatacagcaggtgtgaactgtgagcactgtgaagacctctacaacgaccgtccctgg
agccctgcagaggagggggacacacacgcctgccaacgctgtgaatgtaacaaccacgct
cagcgctgccgtttcgacgaggcggtgtacgaagccagcgggcggaagagtggaggtgtg
tgtgagggatgtctgcaccacaccacagggccaaagtgtgaccagtgtgccccaggctac
cagcccaacccccgcagccacatggaccgccctgatgcctgcctacgctgtgtgtgcagt
gctgaggggacgatgaacgggggccggtgtgacgacagcacaggtctgtgtcagtgtaag
gtgaatgttgaagggccccgctgtgaccgctgtaggagaggctactacggcctgagcacc
tccgaccctttgggctgctccaagtgttcctgctctgtggacggctctctgacagaggtg
tgtgacccgatcaccggccagtgtccgtgtcgtcctcacttccacggcctgacctgtgaa
gtgtgttctaaaggttactggaaaccctctctgtcaggacgctgcaccccctgcaactgt
gaccccaccaggtcctacagtgatacatgtgaccaggtgaccggtcagtgtcagtgcaga
ccgggctttggaggccgaggatgcgccgagtgccccgacaacacgtacggagacgctctc
atcggctgcaagccgtgtcggtgtgatgctgaaggaacacttccagaagtttgtgataag
cagaccggagtgtgtctgtgccggccgggcgtcacggggccccgctgtgactcctgcagt
cggggacactgcgactccttcccgggctgcaccacatgtccctcctgcttcttcacgctg
gacgcccagagacagaacctgagcacagccctggggagactctcccccagcatccctacc
agtcctgcaggttctggtgatcttggaaactttggacctcgcatccgggtcctggagaac
agcctgaacctgatccggggatccatctttcttccactcaataccaccacacagatcgat
gaagctctgtccaaactggacaagctcagggaccaggtggacaaggttaacaatgagcag
tcacccaaggaaagaactcctggtctgggctcagagctggacaaactgcaggctctgctg
gacagtctcactctgcagtacaaagccaagaaagatgcaaaggacaactccgtcagtcaa
aacaattctggagctttttctaccatcaagaacgcctacaatgagtctaccgatgcagct
aagaaagtggatgacagcaaaaccccagtaaaggaatcagctgatctgagaaaagagact
aatgacattcgcgaccaaatacagcccgccaacaccagagacatagcctcccgaccggac
ctcactcctgctgccagacaggtatgtggcagtgtccgctcagagccctgcacccctctg
aagtgtgagggtgaagacttgtgtcctccggagggaaccccaccttgtaaaaagggcgaa
aagtgtgtgggcgccctgccgctcagcaagagggccgacgctgatgtgaaggatgtgaag
gagcgactggaccggctctctgggaagatcaccgatgctgcagagaagctccaggatgca
caggaaaacaccaatcaggtgagactgactgcagagaagctttccaataagatgaagcag
gccagagaagatctagaagacgacttgaaggagacacgtgatgttgtgaacgatctcaag
gatttcctatcagacccttcctccaacctgacccacatccaggaggtgagcgactggatc
ctgaaagccaaattacctctcagtctggatgctctgaagaggaagctcaaggagctgaag
gacctggccgccaacctgcctgacagcacggccgtgctgaaggaggcggagccacagctg
gagacagccaggaaactgctgcaggaagccaaggatgccagggatacggcactaggagta
aaggacggtgtggatgatttgctggaaggcatcgtctcggaggagggctccctcgctgac
ctggatgtcaaactgcagaacagcatggatctcatagagaacctgagcgacaaccttaac
aagaccaaagagcagctgatcccggcggataagactctggatgatgtgtcaaaactgata
aagccgatgaagcctcagctggacgagcttaaagagctgctgaagaacggaggccagctg
gctgaggatgcacaggaagacgcagaaaaggctcaagatgaggcagatgctgctgaagag
gacctggtgcctttggaggagaagctgcagcagctgaaggaaaaggctgcggccaagggc
ccggaggggggggcggggcccgtgggggacaggcttgccaagttaaagcaggatgctgga
gaactggccaacaccaccaacaccatgaccgaggctctggaaggtaaagccgagtccctc
aggtcgctgcaggacgagatcctacagaagtcctcacagcttgaagggctggatgtcaag
cttaaagatcttttggaaaagcttcgtcggaaatctgccatctgccatggctga
DBGET
integrated database retrieval system