Notothenia coriiceps (black rockcod): 104944700
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Entry
104944700 CDS
T04920
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104944700 (snx13)
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104944700 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
104944700
NCBI-ProteinID:
XP_010768574
UniProt:
A0A6I9MQS3
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MSNVPQQRISTTQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIVGGFAVTL
LYGKINSEKHLEKCEHSYLAPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPSELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDYMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQNWQKDGKKQPSNTKGLLKAAALGVYEQYLSDKASPRVQVDEASVIKL
GEKLQKDDPTPEIFDEIQKSVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDDTLHLHAFISDTADACLPGFWGAAGVCNDHGK
TYALYAITVVRRSHDGSEDCWKTYRRYSDFHDFHMRVTEQFENLASILKLPGKKTFNNMD
RDFLEKRKKDLNSYLQLLMNPEMVKACPTLIAYVYDFLENKAYSKGKGEFARKVDTFVNP
LRSSMRNVSNAVKSLPDSLAEGMNKVSDNMGRMSERLGQDIKQSILKVPPLLPKTDIDPE
HCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINR
KIVDHVDYMTSPEQVADYVKKFRDSYWPNGILAETLPRRDKNICQRTRIAAKTSLLGIMP
DELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSR
SPRIHKYSQKLKSSSLKR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtccctcaacaacgaatttctacaacacaacaaacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggccttttatatcttctgcttcattgtagggggctttgcggtcactctg
ctctatggaaagatcaactcagagaaacacctggaaaagtgcgagcactcctacttggcc
cccacacaaattggcatactaaagacattggatgagatgaagttggagatgaagcctata
aaaatagacaggagactgactggctccagttttatagatgaaccactacaacaggtgatc
cagtttgctctgagagattatatccagtactggtactacactctgagcgaggatgagtcc
ttcctattggagatcagacagacgctgcagaatgccctcgtccagttctctacacggtcc
aaagaggtggactggcagccttacttcactactcgcctggtggacgactttgccacccat
ttacgtgtctttagaaaagcccaggaccgcctcgcagacagagaggacaagcaaagggac
ataacggaggagctggtggactccttctttgaggccgaggtggagatggaaaggaagatt
tgtcgagacgtggtgtgcacttcacacaaagatgaagaaggttttcttagggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttccttagggaggtgctggcccgtggtgttctacttcctctgatcaaccagcttagcgac
ccagactacatcaatcagtttgtcatctggatgatacgggactccagctgtaattacgaa
gccttcatgaacatcctgaagctgacagacaagccctctgagctggaggcggtgaaggac
aaggtgctggaggagctgcagtacctccgctccctggacaccgccggagatgacatcaat
gtgatcaagaaccagatcaacagtcttctgtttgtgaagaaggtgtgtgagactcggatc
cagagactacactctggcaaggaggtggatgccctgaagctggcagccaactttggcaaa
ctgtgtgtcattcctctggatcacattctcatccacaacatagccctgcagttcttcatg
gactacatgcaggcggcgggggcccaggcagagctgttcttctggctcactgtggagggc
tacagggtgacggcgcagcagcagctggaggctatgcagaactggcagaaagatggcaag
aagcagcccagcaacaccaaggggctgctgaaggccgctgcactgggcgtctacgaacaa
tacctctcggacaaggcgtcgccccgggtccaggtggatgaagcgtccgtgatcaaacta
ggggagaagctccagaaagacgaccccacaccagagatatttgatgaaattcagaaaagt
gtgtatgacatgatgctacgagatgagcgctactacccctccttcaagcagagtcctctc
tacgtccgcatgctagccgagctggacatgttgaaagagccgagctaccgggggtctgat
gacggggatggagaatccttcaatggctctcccacaggaagcataaacctatctttggac
gatttgtccaactcctgccatgatgatactttgcacctacatgccttcatctctgacaca
gctgacgcttgtctccccggcttctggggtgctgcaggggtgtgcaacgaccacggtaag
acctacgcgctgtacgccatcacggtggtcagacgcagccatgacggcagtgaggactgc
tggaagacctatcgccgctactccgacttccacgacttccacatgagggtcactgaacag
tttgagaacctggcgtcgattctcaagctgccagggaagaagaccttcaacaacatggac
agagacttcttggagaagagaaaaaaagacctcaattcttacctgcagttgctgatgaac
ccagagatggtgaaggcctgtccaactctgattgcttatgtctatgacttcctcgagaac
aaagcctacagcaagggcaagggagagtttgctcgcaaggtggacacatttgtaaatcct
ctgaggagctccatgagaaacgtgtccaacgcagtgaagtctctgccggacagtctggcg
gagggcatgaataaggtctctgataacatgggccgcatgtcagagagactcgggcaggac
attaaacagtccatactcaaggtgcctccactcctccctaagactgacatcgaccccgaa
cactgtcgagtctctgctcagctcgatgacaatgtggatgataacataccgctgagagta
atgctgctactgatggacgaggtgtttgaccttaaggagaaaaaccagtggctgcgcagg
aacataaagaacctgctgcagcagctcatcagagccacgtatggagacaccatcaacaga
aagattgtggatcatgtggactacatgacctcaccggagcaggttgcagactacgtcaag
aagttcagggactcttactggcccaacggtattttggctgagacgctgccccgccgggac
aaaaacatctgccagaggacacgaatagctgccaagaccagtctgctgggcatcatgcca
gacgagttgaaacacatcatcggagcagacaccacgaggaagggcatcctccgcgtcttc
gacatgtttcagtaccagcccatgaaccgccggctagtctacgttttcctggagggcttc
ttggagacgatgttcccccagtacaaattccccgagctctttgtcaagctgcactcccgc
tcgccacgcatccacaaatatagtcagaaactcaaatcttcctccctcaagaggtga
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