Notothenia coriiceps (black rockcod): 104945110
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Entry
104945110 CDS
T04920
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104945110
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104945110
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Motif
Other DBs
NCBI-GeneID:
104945110
NCBI-ProteinID:
XP_010769034
UniProt:
A0A6I9MS85
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MRLILVKPTNATRRLDSTAEVFHDGDHEHCTSGGPAPPTKTPDGMRDRYSGTSGEASSSL
QETCPERSNGISPSRDSAQNLTLSQLSDQDWLLLCGQVSSVGDDSALAGRAGTSVEHPNH
DRCGCSCTDSSQHPEAFSFHPQSKQGTVQDDSLMKVSNKRSLSSSPYTLPFYQSTQASTT
CQVLPQQTNQRDLLKPDTNHTQDNFLPLQFRDQEGRNEQLQQQPCNHFKLRETNQATLFN
IPLNSIECAETNQKPAVPADLNWRELFGKEPLLVQQRQKRDSRCSMNTDQTSKTHGDPSI
VRKCRHLPCNPLTSTVQRSSTPASNKSVQSFTTSQYSSLENQDGVAERARQRQSQTNSLQ
LSGSRFSLPKHTPPPTHDIGINGNAVRPLSSHGTLRSSLSDLHSGQQPLQLLHSAILEDA
FSKVIREDSSKANSENLSREEGSVPRKKTKDISYRLGQRKVLFGKRKQLSDYALVCGMFG
IIVMVIEIELSRELYTKESIYSYVLKGLISLSTAILLGLIGMYHAREIQLFMVDNGADDW
RIAMTFERILFVAFELLICAIHPIPGQYVFTWTARLAFSYTASVADADIDIILSVPMFLR
LYLIGRVMLLHSKLFTDASSRSIGALNKISFDTRFVMKTLMTICPGTVLLVFSVSCWIIA
AWTVRVCERYHDAQEVTSTFLGAMWLVSITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGC
TALVVAVVARKSELTRAEKHVHNFMLDTQLYKKVKNTAANVLRETWLIYKNTKLVKKIDR
ARVRHHQRKFLQAIHQLRRVKMEQRKLTDQANTVCDLAKTQNMMYDLVLELQHRSEELDR
RIVALEEKLDSILLSVQSLPVVLSQAITKLQKDFLDDLACRVHFLSSSLSSECCSVPARQ
LCPGPTTPETPYSS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgattttggtcaaacccaccaacgcaactcgacgccttgactcaacggctgaa
gttttccatgatggggaccacgagcattgtacctcagggggtccagctcctccgacaaaa
actcctgacgggatgcgtgatcgatactcaggcacctctggggaagcatcctcttcactg
caggagacgtgtcccgaaagatctaacgggatcagtccatcaagagattcagcacaaaac
ctaaccttatcacagctgagcgatcaggactggctgctgctttgtggccaggttagcagc
gtaggagatgattcagccttagcggggagagcagggaccagtgtggaacatccaaaccat
gacaggtgtggttgttcctgtacagattctagccaacatccagaggcttttagttttcat
ccgcaatcaaagcagggcacagtccaggatgatagcctcatgaaagtttcaaacaagaga
agcctttcatcttcaccttacaccctgcctttctatcaaagcacccaagcttcgaccact
tgccaggtgttgccacagcaaacaaaccaaagggatcttttaaaacctgacacaaaccat
acacaggataacttcctccccctccagttcagagaccaagaaggtcgaaatgagcagttg
cagcaacagccttgcaatcattttaaacttagagaaaccaaccaagcaactttattcaac
attcctctgaactccattgaatgtgccgagacaaatcagaagcctgctgtccccgcagac
ctcaactggagagagcttttcggcaaagagcctctgttagtccagcaacgtcaaaagcga
gactctcgctgctcgatgaatactgatcagactagcaagacacatggagacccctccatc
gtccgcaagtgccgtcatctcccctgcaaccctttaaccagcactgtgcagaggtcgtct
actccagctagtaacaaaagtgtgcagtccttcaccaccagccagtacagctcacttgag
aaccaggatggagtggcagaaagagccagacagcgacaaagtcagacaaactctctgcag
ctcagtggatcgaggttctccctccccaaacacactcctccaccaactcatgacatcggg
atcaacgggaacgcagtgcgaccgctaagcagccatggcactttaagatccagcctttca
gatctccactcaggccagcagcctctccagctcctccacagtgccatcctggaggacgct
ttttccaaagtaatcagagaagattccagtaaggccaacagtgagaacctgagcagggag
gaaggcagcgttccacggaagaagaccaaggacattagctaccggctgggtcagagaaaa
gttctctttgggaagcgcaagcagctgagcgactacgcgttggtctgtgggatgtttggc
attattgtcatggtgatcgagattgagctgtcaagggaattgtacaccaaggaatccata
tattcatatgtcctgaaaggtctgatcagcctctctactgccattcttcttggactcatt
gggatgtaccatgcaagggaaatccagctcttcatggtggacaacggagccgacgattgg
aggatagcaatgacctttgagcggattctctttgtagcattcgagctccttatctgtgcc
atccatccgatcccaggtcagtatgtgttcacctggactgctcgcctggctttcagctac
acagcatcagtggcggacgctgacatcgacatcatcctctccgtgccgatgttcctgcgg
ctctacctcatcggccgggtcatgctgctccacagcaagctgttcaccgacgcttcgtcc
cgcagcatcggggcgctcaacaagatcagctttgacactcgttttgtcatgaagactctg
atgaccatctgccccggcacagtcctgctggtcttcagtgtatcctgttggatcatcgca
gcgtggaccgtgcgtgtgtgtgagaggtatcacgatgctcaagaggtgaccagtacattt
ctcggagcaatgtggctggtctccatcaccttcctgtccatcgggtacggtgacatggtc
cctcacacctactgtgggaagggagtttgcctgctgacaggaatcatgggagccggctgc
acagctttagtggtcgctgttgttgcaaggaagtccgaactcaccagagccgaaaagcac
gttcataacttcatgttggatactcagctgtacaaaaaggtaaaaaacacagcagccaat
gtgttgagggagacttggctcatttacaaaaataccaagctggtcaagaagattgatcgt
gccagagtacgccaccatcagcgtaaattcctgcaagccatccaccaactgcgaagagtc
aaaatggagcaaaggaaactaactgatcaggccaatacagtttgtgaccttgccaagacc
cagaacatgatgtacgatctggtgttggagcttcaacatcgaagtgaggagctggacagg
aggattgtagctctggaagagaaactggattccatccttctcagtgtgcagtcgcttccc
gttgtgctttctcaagcaataacaaagctacaaaaggatttcctggacgacttggcctgt
cgcgtccacttcctgtcatcctccctgagctccgagtgctgttcagtccctgccaggcag
ctttgtccaggacccacaacaccagagacaccatacagctcataa
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