Notothenia coriiceps (black rockcod): 104945185
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Entry
104945185 CDS
T04920
Name
(RefSeq) cingulin-like
KO
K06102
cingulin
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104945185
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Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
CCDC39
OVT1
DUF3450
LEKR1
Motif
Other DBs
NCBI-GeneID:
104945185
NCBI-ProteinID:
XP_010769121
UniProt:
A0A6I9N480
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MFWQQYRAAAVNTEAGGTTFRGYRIICTGCLQRNQEISMSSPSTDRKPLVDYGVQIRFIK
DLHDTGGGFPDKSKVNGSTATPPSSKYGVAVRVQGISGQPYVVLKDGQKGDSYGVQLNTP
TSSSGPPSPCNSLPKINKEPAGLTNPYRTAVSTARSPVVSPVQDEVGEIFGSPHKRPPGD
GQAGTQGEEEGGAGRQGERSKPEFQLKAAASDAKEKTRDRTDEEYNEAGLKRVKLNGVTP
KGVPKPVSGYTGSLGRYSGKRQSNESSSELFPEPPAATNEEPIPAIDTNSLAPINKLISK
FNSGTPSSAPQTRGRSGARQRLRFDERRRSRSLDARQDVQAEVPSPSSPTFNPYAIPLST
SSYSLASSAPASSSLGSSTASKGKTLDAPKTSFKSPGTVVAKNTYPALAKKPEISQRSQI
KEVTNGEEAQVKQVIYNILKEGTSESEGSLKRKVNLVYDTTGSFKEGGSDGSYNKEQLKR
CKNELQQVHNELAKERMAREGAESRVRLQEDQLAELQEDLRRVSENSPHSDALQTDVMSL
QADLSEANMLRRRQEEILHQRERELTALKGALKEEVECHDTEMEALREQYSQDMDNLRTT
MEQVTQSQEQIEEERERVNTSMFTLEQELDNCRDQEEQWKNQLDASTRDLQTTREESGMP
ISSRMLLKSQLEKDEFEGELKAHRDSLKKQMPASDDNLAEELRRCHDDLKRARTDLDKQK
SELDAKREALEALKKASGDKEAELLSELRKLKEQSQKDKAELEKAKESSVGSSGKTVVDY
GTNLELQETNTRLRERLARMTRLHSSAPRSPETEEAVDALEDENRSLKTQLEEARRGVTR
LGKERDELTRRVEDRDMEREALRRGKTDLEEQKRLLDRALEKISKEMEIMMGDSRQSVAA
LQSQLEDYRERTRKDLMEAQRNCKDRLAELQRAQSSLKAQQEEISRLKKDLLVCSEERDS
AQLERDLLNNRLKHVESDVESEKSTHTDRTREIRGLEDKIKSMEIELDEERTSVELLNDR
ITRSRDQVDQLRSELMQERSARNDLEMDKSTLERQLKELKSRVADMEGQTRPSPGLSLLE
NKIQELEERLRSEEREKASIQASQRRMERKLKELNAILDQERSQHVEQRDQLSLRVKALK
RQVDESEGEVERLEGVRRKVLRDLEEQQELQEAMRAKVSALETELKRKSQKTHRTALGSS
TLSSEDEDGFYDTNITSLLNESNLQTSNC
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgttctggcaacagtacagagcagcggccgtgaacactgaagcaggagggaccacattt
cgcggttataggatcatctgtacaggctgcttgcagagaaaccaggaaatcagcatgagc
tctccgtccactgacaggaagcctctggtggattacggcgttcagatccgcttcatcaag
gacctccatgacacaggtggtggtttccctgataaatccaaagtgaacggcagtactgca
acccctccttccagtaaatacggggtggcagtgcgcgttcagggaatatctggacagccc
tatgtggtgctgaaagatggccagaaaggcgactcttacggagttcagctcaacactccc
acctccagctcagggccaccttcaccgtgcaacagcctccccaaaataaataaagaaccg
gcaggattaacaaacccctatagaactgctgtaagcacagcacgctcccctgttgtttct
ccagtgcaggatgaggttggcgagatctttgggagcccacataaaagacctccaggggat
gggcaggcaggaacacaaggggaggaggagggtggagccgggaggcagggagagaggtca
aaacctgaattccaactcaaagcagcagcaagtgacgcaaaagagaaaaccagagatagg
actgacgaggagtataacgaagcagggctgaaacgtgtcaaattaaacggtgtgacacca
aaaggggttccaaaacctgtctctggttacaccggctctttggggagatacagtgggaag
agacagagcaacgagtcctcttcagagttgttccctgaacctccagcagcgactaatgag
gagcccatcccggcgatcgacacaaactccctggctcccatcaacaagctcatcagtaag
ttcaacagcgggaccccgagcagcgccccacagacgaggggccgctccggggcgaggcag
aggctcaggtttgacgagcgcaggcgatcaagaagtcttgatgctcgacaagatgtccag
gctgaggttccctctcctagctctcccacgttcaatccctacgctattcctctgtccacc
tcctcctattcgttggcatcatctgccccagcgagcagtagcctgggaagcagcactgcc
tccaaggggaagacgctcgatgccccgaagacgagctttaagtcaccggggacggttgtt
gctaagaacacctatccagctctggcaaaaaagcctgagatatcgcagaggagtcaaatc
aaagaggtcaccaatggggaggaagctcaagtgaagcaggtgatttacaacatccttaaa
gagggcacgagtgagagtgagggatccctgaagagaaaggtcaacctcgtctatgacaca
acgggaagttttaaggagggaggatctgatgggagctacaacaaggagcaactcaaacgc
tgcaagaatgaactgcagcaagtccacaatgaacttgccaaggagcgcatggccagagag
ggggcggagtctcgtgtgcggctacaggaagatcagctggccgagcttcaggaggatctg
aggagggtttcagaaaactctcctcactcagacgctctgcagacggatgtgatgagtctg
caggccgacctgtcggaggcgaacatgttacgaaggcgccaggaggagattctacaccag
cgggagcgggagctgacggccctgaagggggcgctgaaggaggaggtggaatgccatgac
acagagatggaggctctgagggagcagtacagccaggacatggacaacctgaggaccacc
atggagcaggtcacacagtcccaggagcagatagaagaggaaagggagagggtaaacacc
tccatgtttacgctggagcaagaactggacaactgcagagatcaggaagagcagtggaag
aatcagctggacgcctcgacacgggatctgcaaaccaccagagaagagagcgggatgccc
atcagcagtcgaatgctgctgaaatcccaactggagaaggatgaatttgagggggagttg
aaagctcatcgggactcgctgaagaaacaaatgcctgcctctgacgataacttagcagag
gagctccggcgttgccatgatgatctgaagcgcgctcgcaccgatctggacaagcaaaag
agcgagttagacgcgaagagagaggcacttgaagccctgaagaaggcgagtggagacaaa
gaggccgagctcctgtctgaactcagaaagttgaaggagcagtcgcagaaagacaaggcc
gagctggaaaaggcgaaggagtcgtccgtcgggtcttcaggaaagaccgtggtggactac
ggcaccaacctcgagctccaggaaacaaacactcgcctcagagagaggctggcccgcatg
acgaggcttcactccagcgctccccggagccccgagaccgaggaggcggtggacgctctg
gaggacgagaaccgctccctgaagactcagctggaggaggccaggagaggagtcacccgc
ctgggcaaggagagggacgagctaacccggcgggtggaggacagagacatggagagggag
gcgctgaggaggggcaagacggacctggaggagcagaagaggctgctggaccgagccctg
gagaagatcagcaaagagatggagataatgatgggagattctcgtcagtcggtggccgcc
ctgcagtcacagctggaagactacagggagcgcacgaggaaggatctgatggaagcccag
agaaactgcaaggaccggctggctgagctgcagagggctcagagcagcctcaaggcccag
caggaggagatttcccgcctaaagaaggatctgctggtgtgcagcgaggagagagacagc
gcccagttggagagagatctccttaacaacaggctcaaacacgtggagagtgatgtagaa
tcagagaagagcacacacactgaccgcaccagggagatcaggggcctagaggataaaatc
aagtcaatggagattgaactggatgaggagaggacgagcgtggagcttctgaacgatcgc
atcacacgtagcagagatcaggtggaccagcttcgctcagagctcatgcaggagcgctca
gcacgaaacgacctggagatggacaagagcacactcgaaagacagctgaaagagttgaag
tcccgcgtggcggacatggagggacagacccggccctcacctggactcagcctgctggaa
aacaaaattcaagaattggaagagagactacgcagtgaagaaagagagaaggccagcatc
caggcctctcagagacggatggagagaaaactgaaagagctaaacgccatattggaccag
gagagaagccagcacgtagagcagagagatcagctgtctctgcgtgtgaaggccttgaag
cggcaggtggacgagagcgagggagaggtggagcgattggagggagtgcggcggaaggtt
ctccgggacctagaggagcagcaggagcttcaggaggcaatgcgtgccaaagtctcagcc
ctggagactgaactaaagcggaagtcacagaaaacgcatcgcaccgctctgggctcctcc
actttaagctctgaggatgaggacggtttctatgacaccaacatcacctccctcctcaac
gagagcaacctacagaccagcaactgctag
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integrated database retrieval system