Notothenia coriiceps (black rockcod): 104945285
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Entry
104945285 CDS
T04920
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104945285 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104945285 (rnf43)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104945285 (rnf43)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104945285 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf_RING_Vps8_fungal
FANCL_C
Motif
Other DBs
NCBI-GeneID:
104945285
NCBI-ProteinID:
XP_010769236
UniProt:
A0A6I9N4J0
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MPATEGECGNQLAGAQRMGVGVKDEVNVLELNNQHVDVFTGWPSSMGAAEQSRSLGLRAL
WELWYHPLSLCNTSEDERQEGDFITIVKLEHSAPRCLPLVDKARMALDKGAQAVIFDVSD
DANAAFELGGIDFVRGPVVLVEAQNAEELMGLVNKNEEAKVTIELLVELPSWQHYDVGIL
LTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGCSGAHRHRAAW
GSASSSNSSPVCAICLDDFLDGQHLRIISCAHEFHKECVDPWLLQHRTCPLCMHNIMGME
RQPQRASRQSQEQNQSFLHPQPFSSPHSHLFPQHAIPFSMRPHYPRGPSGPYPSLGHYSG
SSPVDAQTLRFLTSRQLASSCGYHRPVEGPGRPHRMSGNCRTSTHHYTPRRPCHNNYRSA
CPAQRSASSSRLQHASSTPQPRGAPPHTRQDDGSCSGGSYHTERSGYLADGPASDSSSGP
CHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGHGPRRSSLEEGAQA
RPRSLDSVVNKAGCPEEQQQTVFSHIHYHRHRHHHYEEGEHSRGSDEEQGAAAADAAASA
APLLDKDSPMCPPKHSPCQCPKPEPTDRPSPGAECQDPSSPPPVLVSPIPLQLQPHCCHQ
GHGHPPAPLGRVGGYVHDGPSVRFHQSRDLQDDRSIHIHYGQGPGFCCSPPELHPALLPV
PLILDSGGIEEWPCYTGAHVVWQKRVQQARSEPQLLGPGAPMDRPPCRFYHGPAADCNTD
ICLYCQTLHHNQGSEEESGV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctacagaaggggagtgtgggaaccaactggccggtgcacagaggatgggggtg
ggggtgaaagatgaggtaaatgttctggagctcaacaatcagcatgttgatgtcttcact
gggtggcctagttctatgggagccgcagaacagagcaggtcgctgggtctcagggcgcta
tgggagctctggtatcaccctctgtctctgtgcaacacaagtgaagatgaacgccaagag
ggtgacttcatcaccattgtcaaactggagcacagtgcaccccgctgtctgccgctggtt
gataaggctcgtatggcattggacaaaggagctcaggccgtgatctttgatgtcagtgat
gatgccaatgctgcttttgagctgggagggatagacttcgttcgcggccctgtagtactg
gtggaggcacagaatgctgaggagttgatgggtttggtcaacaagaacgaagaggccaaa
gttactattgagctcctggtggagctgcccagttggcaacattacgatgttggtatcctg
ctcaccattgtcctagctattctgaccatcgttctaatcttcgctttccgctacaagtgc
aagtccaaccggacctgggactcagtccatcagcagaccatgcgggccatcagtcgcctg
gagaccaagacgtacagctctcagggctgctcgggggcccatcggcaccgcgcagcctgg
ggctcggccagcagctccaactccagcccagtctgtgccatctgcctggacgatttcctg
gacgggcagcatctgaggatcatctcctgcgctcacgagttccacaaagagtgtgtcgac
ccctggctgctgcagcaccgcacctgtcccctctgcatgcataacatcatggggatggag
cggcagccccagagggccagcagacagagtcaggagcagaaccagagcttcctgcaccct
cagcccttcagcagcccacacagccacctcttcccccagcacgccatcccgttctctatg
aggccccactatccccggggaccctcaggaccgtacccctctctgggccactactctggc
tcttctcccgtagacgctcagacactacgcttcctcaccagcaggcagctcgcctccagc
tgtgggtaccaccgtcctgtggagggtcccgggaggccccataggatgagtggtaactgc
aggacttccactcaccactacaccccccgtcggccctgccacaacaactaccgctcagcc
tgccctgcccagcgcagtgcatctagctccagactgcagcacgcctcctccacgccacag
ccccgcggagcgcccccccacacccggcaggacgacggcagctgctcgggggggagctac
cacacagaacgcagtgggtacttggctgatgggccagcaagtgactccagttcggggcca
tgtcatggctcctccagcgactccgtcctgaactgtactgacgtatccctgcagggggtc
tatggcagctggtccaccttccggagctccctgagcagtgactacgatccgtttgtgtat
tacgggccaggtcctgggcacgggccccgcaggagcagcctagaggaaggggcccaggcc
cggcccaggtctctggattctgttgtgaacaaagcaggctgccccgaggagcagcagcag
actgtgttcagccacatccactaccaccgccacagacaccaccactatgaagagggggag
cacagcaggggctcggacgaggagcagggggccgctgctgctgatgcagctgcttctgct
gctcctctcctggacaaagactcgcccatgtgcccccctaagcacagcccctgccagtgc
ccgaagccagagcccacagaccggcccagtccgggggccgagtgtcaggaccctagcagc
cctcctccagtcctggtgtccccaatccccttacagcttcagccccactgctgccaccag
ggacacggacaccctcccgctccacttgggcgagtggggggctacgtgcacgacggcccc
tctgttcgcttccaccagagccgggatctgcaggacgaccgcagcatccacatccactat
ggtcaggggcccggcttctgctgctccccccctgagctgcaccccgccctgctccccgtg
cccctcattctggactctgggggtattgaggagtggccctgctataccggagcccatgtt
gtgtggcaaaagcgggtgcagcaggcccgctcagagcctcagctcttggggcccggggcc
cctatggacaggcccccctgcaggttctaccacggtccagctgctgactgtaacacagac
atttgtttgtactgccaaaccttacaccacaatcagggatcagaagaggagtccggtgtg
tga
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