Notothenia coriiceps (black rockcod): 104945323
Help
Entry
104945323 CDS
T04920
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104945323 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104945323 (exosc1)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104945323 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104945323 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
104945323
NCBI-ProteinID:
XP_010769270
UniProt:
A0A6I9N5D3
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCSTEDCIPGTGIYLRHGCIYSSLTGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPQTHSKE
FRKVARVQPEFLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctatgaagctgtgtgttccaggtgacaagctatgcagcacagaagactgtatt
cccggcacaggaatttatctgcgacacggctgcatttactcctcactaacaggctatgtg
cttaagaaaaatgaaggagaggagttaccagtgatctcggttgtaagggaaacagaaaca
caactactaccagatgtaggagctatagtcacctgtaaggtgaccagcattaaccccagg
ttcgcaaaagtccacatcctttatgtgggctccacaccgctgaaggaccgcttcagagga
actatcaggaaagaagatgtgcgtgccacagagaaagacaaggtagagacgtacaaaagc
ttcagacctggcgatatcgtcttggccaaagttatttctctcggagacgtgcagtcaaac
tacctgttgacaacagcagagaacgagctgggggtggtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgtgagatgcagtgcccgcagacgcacagcaaagaa
ttccggaaagtggcgcgagtgcagccggagtttcttcaggcatga
DBGET
integrated database retrieval system