Notothenia coriiceps (black rockcod): 104945359
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Entry
104945359 CDS
T04920
Name
(RefSeq) interferon regulatory factor 7-like isoform X1
KO
K09447
interferon regulatory factor 7
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04620
Toll-like receptor signaling pathway
ncc04621
NOD-like receptor signaling pathway
ncc04622
RIG-I-like receptor signaling pathway
ncc04623
Cytosolic DNA-sensing pathway
ncc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104945359
04621 NOD-like receptor signaling pathway
104945359
04622 RIG-I-like receptor signaling pathway
104945359
04623 Cytosolic DNA-sensing pathway
104945359
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104945359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104945359
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104945359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104945359
NCBI-ProteinID:
XP_010769312
UniProt:
A0A6I9MY76
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MQSPTKPQFSSWLIEQVGAGQYPGLCYVGINKFRVPWKHNSRRDCNDEDSKIFRAWSEAS
GKIHEFPNNKARWKTNFRCALNNLSKGFELIRDNSKNKEDPHKIYEIINTDSGNLESQPV
QDSQEDADMSPDIYNSPTEDQPSGNELILLNNFMTLDLGSQPSDVQLWAKDYVQQNPAVP
ESYPVAAESHPQHIAEPPAYLNPPQVLSSPLQPTIYDLEISIHYRKREMLKTTFSTALLQ
LHYHNEVPEFNAHRLCFPSTDGLLDQKQVEYTNRILNSIQRGLFLEVRDTGIYAWRQDKC
HVFASTSDPSVAHPNPSKLPPNTIVTLLSFEKYVHELKQFKENNGGSPEYAINMCFGEKF
PDGKPLEKKLIVVKVVPLICRHFHEMAQMEGASSLHSSNVSLQISHNSLFDLINNVFSLP
TAEEPARAAAPFQTQI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctaccaagcctcagttttccagctggctcatagagcaggttggggcgggc
cagtacccgggcctgtgctatgtgggcataaacaagttcagagtcccctggaagcacaac
tccagaagggactgcaatgatgaagacagtaaaatattccgggcatggtcagaagcaagt
ggaaaaatccacgagttcccaaacaacaaggccaggtggaaaacaaacttccgatgcgct
ctcaacaacctctctaaaggtttcgagttgataagggataattccaagaataaggaagac
cctcataaaatctatgagatcatcaacactgactcaggcaaccttgaaagtcagccagta
caagactcccaggaggatgctgacatgagtccagatatctacaactctcccacagaggac
caaccttcaggaaatgagctaattcttctgaacaatttcatgaccttggaccttggcagc
cagccatcagatgtgcaactatgggcaaaagactatgttcagcagaatccagctgtccct
gaaagctatcctgtagcagccgagagccatccacagcatatagcagagccgcctgcttac
ttaaatcctccacaagtcctcagttcacctctgcagccgactatatatgacctggagatc
tccatccactacaggaaaagagaaatgctaaagactacgtttagcactgcacttctccag
ctccattaccacaacgaggtccctgagttcaacgcacatcgtctctgcttcccctccact
gatggtctgctcgaccaaaagcaggttgagtacactaaccgcatcctgaacagcatccag
agaggtctctttctggaggtacgggacaccggtatctacgcctggaggcaggacaagtgc
catgtgtttgccagcaccagtgatcccagtgtggctcaccctaaccccagcaagctgccc
ccaaacaccattgtgacgctcctgagctttgagaagtatgtgcatgaactgaagcagttt
aaagagaacaatggtggctctcctgaatacgccatcaacatgtgctttggagagaagttt
cctgatgggaaacctttagagaagaagcttatagttgtcaaggtggtccctctgatctgt
cgacactttcatgagatggcccagatggagggggcttcgtctcttcacagcagcaatgtc
agcctccagatctcacacaacagcctctttgatcttattaacaacgtctttagtctaccc
acagctgaagagccagcgagggctgctgcaccttttcaaactcaaatatga
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