Notothenia coriiceps (black rockcod): 104945461
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Entry
104945461 CDS
T04920
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104945461 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104945461 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104945461 (snf8)
Membrane trafficking [BR:
ncc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
104945461 (snf8)
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104945461 (snf8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
AbiEi_4
RPA_interact_C
Sigma70_r1_1
Phage_Mu_Gam
MarR
Motif
Other DBs
NCBI-GeneID:
104945461
NCBI-ProteinID:
XP_010769438
UniProt:
A0A6I9N1M8
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGNVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
NPQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIVEVCLALKHRNGGLIT
LDELHQRVLKGRGKYAQDVSQDDLMRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKESLKWEKERACHVLDHLLKEGLAWLDSQASGEAQYWLPALF
SEIISRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaagaggagttggtgcgggagccatcgccaaaaagaagctcgcagaggccaaa
tataaagaaagaggaaatgttctggctgaggaccaaattgtccagatgtcaaagcagctg
gagacctttaagtccaacctggaggagtttgccagcaagcacaaacaagaaatccgaaag
aacccacagttcagggttcagtttcaggagatgtgtgccaccattggagtcgacccactt
gcctctggcaaaggtttttggtctgagatgcttggcgtaggtgacttctattatgagctc
ggtgtacagattgttgaagtgtgcctggccctgaaacacagaaatggagggcttattact
ttggatgaactccatcagagagtactgaaaggaagaggtaaatacgcccaggatgtgagc
caagatgacttgatgagggccataaagaaactgaaggtgatggggaacggcttcgggatg
attcctgttggagggtcttatttggtccagtcggtcccagcagagctcaacatggaccac
actgtcgtcctgcagctggccgagaaaaagggctacgtcacagttagtgaaatcaaggaa
agtctaaaatgggagaaggaacgggcttgtcacgttctggatcacctgctgaaggaaggt
ttagcctggttggactctcaggcttctggagaagctcagtactggctgccagctctcttc
tccgaaatcatctcccgtgatgtcacgccagaggaggccaatcagatgacgccttga
DBGET
integrated database retrieval system
