Notothenia coriiceps (black rockcod): 104945765 Help Entry 104945765         CDS       T04920                                  Name (RefSeq) dmX-like protein 1   KO K24155   rabconnectin-3a Organism ncc  Notothenia coriiceps (black rockcod) Pathway ncc04142   Lysosome Brite KEGG Orthology (KO) [BR:ncc00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     104945765  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ncc04131]     104945765 Membrane trafficking [BR:ncc04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     104945765  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     104945765    RAVE complex     104945765 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C PBP1_TM Motif Other DBs NCBI-GeneID:  104945765 NCBI-ProteinID:  XP_010769785 UniProt:  A0A6I9N6T5 LinkDB All DBs Position Unknown AA seq 1814 aa AA seqDB search MPLKVGLFNNIYCYSLQQGKQTQLLHVFEEDLILGSERTEDTQETPDSPHTASSDTAFSA RFFLVVVELTPTGRSLLHMWHLHLAARPITTEETSTKNDASSASDMNSSTFSFDTFGSPV PQKSKPCTSNLQSACRLSLTTHRLYSQEMALPEGVEAISVTPSAGHLSASCSLPADRLPY LLATSCSDGKVRFWRCTVMEPSSMDNLLYQWEEWPLLVEGMLPNSSAVSVQGHPIEVSCC HSGRIAVAYRQTPNSPLNSTPYLNSQALLTCPPTLASSPFINSTNTHMTPTVTVQHSPNL TPSPNQANTNEPLVHISIFQCESTGGSQWILEQTIVLDSTESANIPGAMDCPIPNQYCPA SSSASLVHLDWVSQEDGSHVLTVGIGTKIYMYGRLSGKPPELGLSSEASRDLSSSRLVLL RSVNLVSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPLKASVAQDTDMSSS VSSIISAVRQSQEEGLSSGAPMSTLAPPKRALTRSMMSLAQKLSGKRTAYDLPLEKEDSG LFEAAHQLFPTLPQYHPVQLLELMDLGRVHRAKAILSHLVKCIAGEIVALKDSTTNPEKR LRSRTISAGGSTARDSKLFSKAENSPPDYTEISSIPPLPLYALLAADDEDTSPKPDKVSS VSGDSGHGSSHADVYDELFQAPSIVDLDPLEDDQEETGNKVIDLSQYSPTFFGPEHAQVL SSHLLHSSLPGLTRMEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRL HTFLSTSLPPAHRAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGV GWWLRSTNKLRKCIEKVAKTSLQKNNDPLDAAIFYLAMKKKAVVWGLYRSQRNAKMTEFF RNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVIS RLYESEFETASTYKKILRRNVLGQDKQIPAQKDPFVRSMAHWVLEDYSRALDTLLEQPAD RTSSQSTESKCDTGSSSVSVCNPEVFNFYTYLRTHPLLLRRHFGSSEKAKVGLTAERRRA DSISLEERRLFFTAAYAHLQAGCPMLALEVLSKMPKVRKHSKLPHHEGAGIAAELSVGSK DGQGSEQDWSQSALNGYESDRNSLCNSHSDSVLSFDWTGQPSMTHPDETLELKWESDKDD EEDEDEEETKNGKSGRTEDGSSVFQDAQDAMSPLMETVPGEESEDDFLAPSNDILAAHLK FTACLKIMTNELRTLSTGYELDGGKLRYQLYQWLEREVVALQRCCSYKPCLPELSVSGLG EEEQPGSPRADIQRSRWHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQ DDSLQAVMPCCQPTSIPLLMACTANVKTVVANPIVYLTNLAHDILQTINSLDSPPHPDVV NNEIYVMHTLAASLSACIYQCLCDGHTHSHVNHFTGIVYQSVLLSQKQPARTVSMDESVQ PNTPPAQWPGIASLIRLLSSAGEESQPGLAVLLCEIVTAVFLSLFVHGMATHSSNELFRI VAHPLNSQLWVSVFGGGARTPVIEKPTSPTRTPPPASPSGSDRKSRRFRLLSSRSGSKDE LGIEREGPSSPKHSPVVEQEATSIFKERFIPPELSIWDYFITMPSLPQSENQIEYDSEES QDSQDEEEDDDQYEDVFDPSSPHREHSNHNSYSWCLMRLAMVQLVLVNLKTFYPMAGYDL LDLPVCSPLCHAVLKTLQRWEQVLQKRLEIFGGPPSKYISTTPQDETTAPGPALLRHKAL FEPSNTPFRGFNKL NT seq 5445 nt NT seq  +upstreamnt  +downstreamnt atgccattaaaggtggggctctttaataatatctactgttattctttacagcaggggaag cagacccagcttcttcatgtgtttgaggaggatctgatactcggcagtgagagaacggag gacacacaggaaacccctgattcccctcacactgcctcaagcgacacagccttctccgca cgtttcttccttgttgtggttgaattgaccccgacaggtcgctcactcctccacatgtgg catcttcatctcgctgcccgacccatcaccacggaagagacctcgacgaagaacgatgcc agctcagcttctgatatgaacagctctacgtttagctttgacacgtttggttctccagta cctcagaagagtaaaccctgcacttcaaatctgcagagtgcctgtcgcctcagcctcaca acacacaggctctacagccaagagatggctctgccagaaggggtggaggccatcagtgtg actccttcagcaggtcacctgagcgcatcatgctctctgccagctgatcgtctgccttac ctgctcgctacttcctgttcagatggaaaggtgcgtttctggaggtgtacagtcatggag ccttcaagtatggacaacctgctgtaccagtgggaagagtggcctctgctggtggaggga atgcttcctaacagcagcgcagtgagcgtgcaaggtcatcccatagaggtgagttgctgc cactcgggacggattgcagtcgcctacaggcagacaccaaactcccctctcaactcaaca ccttacctgaactctcaggcacttttgacttgtcctcctactctggcctcctcccctttt ataaacagtaccaacacccacatgaccccaactgtgactgtacagcacagcccaaatctc acccccagccccaaccaagcaaacaccaatgagccactggtccacatcagcatctttcag tgcgagtccactggtggctcacagtggattctagagcagaccatagtcctggacagcaca gaaagtgccaatatcccaggtgccatggactgtcctatacctaaccagtactgtcctgcc tctagtagtgcgagtctggttcatttggactgggtctcgcaagaagacgggtcacatgtc ctcactgttggtatcggcacgaagatttatatgtacggccgtctctctgggaaacctcca gaactgggtttgtcatcagaggccagtagagacctgagctcgtcccgcctggttctgctg cgctcagtcaatctggtctcctctgtggaaggctccttacccattcctgtgtccctctcc tgggtgagagatggcattttggtagtaggcatggactgtgagatgcacgtctactcccag tggcagcccccggccccattgaaagccagcgttgcccaggacacagacatgagcagcagc gtctcctccatcatctctgctgtcagacagagccaggaggaggggctcagctctggggcc cccatgtctacactggcccctccaaaaagggccctgacgagatccatgatgagtcttgct cagaaactcagtgggaagagaacagcttacgacctgccgctggagaaggaagattctggg ctttttgaagcagctcaccaactctttcccactctgccccagtaccaccctgtacagctg ctggagctcatggatctcgggagggttcaccgtgccaaagccatcctgtcccatctggtg aaatgcattgctggagaaattgtggctcttaaagacagtacgaccaaccctgagaaacgc ctgcgctctcgaaccatcagcgccggaggcagcacggccagagactccaaactgttcagc aaagcagagaactccccccctgactacacagagataagctccatccctccgctgcctctc tacgccctgctggcagccgatgatgaggacacgtcacctaaacctgacaaagtgagcagt gtgagtggagacagtgggcacggttctagtcacgctgatgtctatgatgagctctttcaa gcgcccagcatcgtggatctggaccctctggaagatgatcaagaggaaacgggaaacaag gttattgacctgtcgcagtacagtccgacattcttcggtccagagcatgctcaggttctg tccagtcacctcctgcattccagtttgcccggactgacccgtatggagcagatgtctctc atggcgctggccgacaccatcgccaccacaagcacagacctcaaggacagccaaggcaag agtaaaggtggtgagacgctggatgagtgcggtctgaagttcctgctcgccgtcagactc cacaccttcctctctacctcgctgcctccagcacaccgagcacagctgctacggcaaggc ctatcaacatgtcactatgcctgggccttccactccgaggctgaggaggagctgctgaac atgctgcctgctctacagaagggagagcccacctggccggagctgcgctccatgggcgtg ggctggtggctgcgcagcaccaacaagttacgcaagtgtatagagaaggttgccaagact tctttacagaaaaacaatgatcctctggatgcagctatattttacctcgcaatgaagaaa aaggcagtggtctggggattgtacagatctcagaggaatgccaaaatgacagagttcttc cgcaacaacttcagtgaggacaggtggaggaaggcagctctgaagaacgccttttctctg ttggggaagcagcggttccagcattctgcagccttcttccttctagccggctctctaaag gatgctgtggaggtgtgtatagagaaaatgcaggacctacagcttgcactggtgatctcc agattgtatgagtccgagtttgaaacagcatccacctacaaaaagatcctccggagaaat gttctgggacaagacaagcagattcccgcccagaaggatccgttcgtgcgtagcatggct cactgggtcctggaggactacagcagagcgttggacactctcctcgagcagcctgctgac agaaccagctcccagtccacggaaagcaaatgtgacaccggctcctcttcagtgtctgtc tgtaaccctgaggttttcaacttttacacctaccttcgaacccacccactcctccttcgc cgccactttggctcctcggagaaggctaaagttggactgaccgctgagcgccgcagggca gactccatcagcctggaggagaggagactgtttttcacagctgcttacgcacaccttcag gctgggtgccccatgctggcacttgaagtcctctccaagatgcccaaagtccgcaagcat tccaaactcccacaccatgagggtgcaggcatcgcggctgaactcagcgttgggagcaaa gatggacaaggttcagagcaggactggtctcagtcggctctgaacggctacgagtcagac aggaacagcttgtgcaacagccactcagattcagtgttgagttttgactggaccggccag ccgtcgatgacacatcctgatgaaaccctggagctgaaatgggagagtgacaaagatgat gaagaagatgaggatgaagaagaaacaaaaaatggtaagagtggcagaactgaagacggc agcagtgtgtttcaggatgcgcaggatgccatgtcgccgctcatggagactgtgccagga gaggagagtgaggatgacttcctcgctccttctaatgacatcttggcggcccatctgaag tttaccgcctgcctgaagatcatgaccaatgagctgcggacactgtccacgggctatgaa ctggatggagggaagctacgttaccagctctaccagtggctagagagagaggtcgtggct ctccagcgctgctgcagctacaagccctgcttgccagagctgtctgtctccgggctgggc gaggaggaacagccggggagccctcgtgctgacatccagaggagcaggtggcactggctg cagagcaaccagcccctactgaggatgtttctgagctactgcagtttacatggctcccac ggaggaggactggcctctgtgcgcatggagctcattctgttgcttcaagagtctcaccag gatgactccctgcaagcggtgatgccatgttgccaaccaacatccatccccctcctgatg gcctgcacggcaaacgtaaagacggtggtggccaatcccatcgtctacctgaccaacctg gctcatgacatcttacagaccatcaattcactggactctcctccacaccctgatgttgtc aacaatgagatctacgtgatgcacacattggctgcctccctgtccgcctgtatctatcag tgtctgtgtgatggacacacccacagccatgtgaaccacttcacaggaatcgtgtatcag agtgttttgctatctcagaagcagcctgcccgaaccgtcagcatggacgagtccgttcag cccaacaccccccccgcacagtggccaggtatcgcctccctgattcgcctgttgagctcg gcaggcgaggagagccagccaggcttagctgtgctgctctgtgagatcgtgactgctgtc ttcctcagtctatttgttcacggcatggccactcactcaagcaacgagctgttccgcatc gtggcccaccctctcaacagccagctttgggtgtcagtgttcggaggaggcgctcggacc cctgtcatagagaaacccaccagccccacaagaacaccgccaccagcctcaccaagcggc tcagacaggaagtccagacggttcagactcctgtcctcacgcagcggatccaaggacgag ttggggatagagcgtgagggcccatccagtcccaagcacagccctgtagtggaacaggaa gctacctccatctttaaagaacggtttatccctccagagctcagcatttgggattacttc atcaccatgccttcactgccacaatcagagaaccaaattgaatacgactcggaggagagc caggacagtcaagatgaagaggaagatgatgatcaatatgaagatgtgtttgaccccagc tctccgcacagagagcattcaaaccacaactcatacagttggtgtttgatgcgtctggca atggttcagctggtgttggtcaacctcaaaaccttttacccaatggcaggatatgatcta ttagacctgcctgtgtgctctcctctgtgtcacgctgtgctgaagacgctgcagcgctgg gagcaggtgctgcagaaaaggctggagatcttcgggggccccccttcaaagtacatctcc accaccccccaggatgaaaccacggcgcctggtcccgccctgctcagacacaaggccctg ttcgagccttccaacaccccattcaggggctttaataagttgtaa

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