Notothenia coriiceps (black rockcod): 104945865
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Entry
104945865 CDS
T04920
Symbol
capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104945865 (capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncc01002
]
104945865 (capn3)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
104945865 (capn3)
Peptidases and inhibitors [BR:
ncc01002
]
Cysteine peptidases
Family C2: calpain family
104945865 (capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
SRR1
Motif
Other DBs
NCBI-GeneID:
104945865
NCBI-ProteinID:
XP_010769893
UniProt:
A0A6I9N302
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MGDEQHREPVIEDIQVKVLYENEASSGPDEKAAYPPVGTNSIYSAILSRNEAVKDATRLK
TFLELRDKYVKKKVVFEDPLFSANDSSLFYSHKPTMKIEWKRPSEICDDPQFIVDGANRT
DICQGTLGDCWLLAAIACLTVNEKLLYRVIPPDQSFTENYAGIFHFQLWRYGEWIDVVVD
DRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEYF
ELSEAPKELYSIMRKALDRGSLMGCSIDITSANEMESRTEQGLVKGHAYSIIGLAECDEV
AKDTKIRLIRLRNPWGWVLWKGPWSANSKEWSTISTAEKENLKKQTVEESEFWMAFDEFK
KNFTKLEMCNLTPDTLQCEERTSWTVSVNEGRWVRGSSAGGCRNNKNTFWTNPQYRLQLS
EEDDDPEDRQAACTVVVALMQKGRRMQRHQGAKFFTIGFSIYEVPKEMLGQNQHLQKDFF
LYNASKAKCKTYINLREVTERIHLPPGEYVIIPTTFEAHQEGEFILRVFSEKQNITEEED
SVGSDKTQQDTKKKEKPIVFVSDRAKANKEIEHDGIRGEKKNKKPKINLLQEEEETEEEK
RFRAIYQTIAGDDMQICANELKTVMKNVLSKHNDIKTEGFSLETCRSMIALMDTDGTGKL
NLQEFKHLWKKIKEWQLIFRKYDKDKSCSISSFEMRNAVNDAGFHLNKQLYDIIAMRYAD
EHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGVIKLNVLEWLQLTMYS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgagcaacatagagagcctgttattgaagatatacaggtgaaagtgctttat
gaaaatgaagcatcatctgggcccgatgagaaggctgcctaccctcctgttggaactaac
tccatctactctgccattctgagccgaaacgaggctgtcaaggatgccacgcgactaaag
acctttttggaacttcgagacaaatacgtgaagaagaaggtggtgtttgaagaccccctg
ttttctgcaaatgactcctcactcttttacagtcacaaacccaccatgaagattgagtgg
aaacgtccctcggaaatatgtgacgacccccagttcattgtagatggagccaacaggaca
gacatctgtcaaggaacattaggtgactgctggctgctcgctgccatcgcctgcctcact
gtgaacgagaagctgctgtacagagtgatcccccccgaccagagcttcaccgaaaactac
gccggcatcttccatttccagctgtggcgttatggagaatggatcgatgtggtggtggac
gaccgtatccccacctgcaacaaccagctggtcttcaccaaatctttcaggaagaacgag
ttctggagcgctcttctggaaaaagcttatgccaagttgcacggatcgtatgaagccctt
aaagggggcaacactttggaggccatggaggatttcaccggaggggttacagagtacttt
gagttgtctgaagcccccaaagagctctacagcatcatgaggaaggcgctggacaggggc
tcgctgatgggctgctccatagatatcacttcagccaatgagatggagtctcggactgaa
cagggtctggtcaaaggtcatgcttactccatcataggcctggcagagtgtgacgaggtg
gcaaaggataccaagattcgcctgattcgcttacgcaatccctggggctgggtgctgtgg
aaaggaccatggagtgcaaattcaaaggaatggtcgaccatttccacggctgaaaaggaa
aacctaaaaaaacagactgtagaggagagtgagttctggatggcttttgatgaattcaag
aagaacttcacaaagctggaaatgtgtaatctgactcccgacaccttgcagtgtgaggag
aggaccagttggacagtgtcggtcaacgagggtcgctgggtgcgaggcagctctgccggc
ggctgcaggaacaacaaaaacactttctggacgaaccctcagtatcggttgcagctgtcc
gaggaggacgacgaccctgaggaccgccaggcggcctgcaccgtggtcgtggctctgatg
cagaaaggtcgcaggatgcagcgccaccaaggggccaagttcttcaccattggattttcc
atctacgaggtgcccaaggagatgcttggacagaatcaacacctgcagaaggacttcttc
ctgtacaacgcctccaaagctaaatgtaagacctacattaacctgcgcgaggtgacggag
cgcatccatcttcctccaggagagtacgtcatcatccccaccacctttgaagcccatcag
gagggggagttcatcctcagggtcttctctgagaagcagaacattaccgaggaggaggat
agcgttgggtctgacaaaacacagcaagacacgaaaaagaaggagaagcctattgtattt
gtgtcagacagagcaaaagccaacaaagaaatcgagcatgacggcattcggggagagaag
aagaacaagaagcccaagataaatctactccaagaagaggaggagactgaggaggaaaaa
aggttcagagccatttaccaaacgattgctggagatgacatgcagatctgcgctaacgaa
ctcaagacggtcatgaagaacgtgctctctaaacataatgacataaagacagagggtttc
agccttgagacatgtcggagtatgatcgccttgatggatactgatggtacggggaagctg
aacctgcaggagttcaaacacttgtggaaaaagatcaaggagtggcagctgatcttcaga
aaatacgataaagacaaatcttgctccatcagtagttttgagatgaggaacgctgttaat
gatgcagggttccacctgaacaaacagctgtatgacatcatagccatgcgctacgcggac
gaacacctcaacatcgacttcgacagttacatctgctgcttcgtgagactagagggcatg
ttcagagcttttaacgccttcgacaaagacggagatggagtaataaagctcaatgtgctg
gagtggcttcagctgaccatgtattcttaa
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