Notothenia coriiceps (black rockcod): 104946040
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Entry
104946040 CDS
T04920
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104946040 (rnf20)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104946040 (rnf20)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
104946040 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
CC_Bre1
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104946040
NCBI-ProteinID:
XP_010770085
UniProt:
A0A6I9N3M1
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MSGQKRPSDPCGPSSSGAPPEKRREREGEDGAPGVSTGGSTAVETVIKLGGVSNSEEQDI
RALQTKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQLTI
RRYDQASSEPEKSQTGEGRSLKPDTPEPDGDSNQERAKDRGNQGEPNNSFLATLASSSSE
EMEAELQERVEKSQKQASHVVEIYECLKRTVDQLKTELDSGADSSLWQAASKQNTLLTNE
NKRLQQLTEDFKQKHSHMTSQTRPLGRAANKADQRVSELQVLIEELQWDMEKIRRRENRL
NAHLTEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSDMEENTELADNRFVELQKL
QQDLQTVHQENNNMKAELLIRAEGVVKETSEYRCLQSQFSVLYNESLILKSQLDETRARL
NTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANEQA
GPINREMRHLISTLQTHNQQMKVEVVKYKIRLRETQAELNQVRASKGNAILQSQSSTEMD
VKDETTSPSTPAVSGEPVVKSEADNGSSTPSSTGASVKTEPGAEPEATVKEEEKDEKKEK
EEKREKDIIKKEEKDREREKEKEKERERPTRSSGSSSVMKEERTGCSQPEELAGERPSIG
GSKRKEMEQLKIIRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKSKSEGEE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVD
AQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESAVLSEEVRTQLEQVQQ
RLKLVREEVIENSISREKESFNARRAQEDISKLRGKIEKAKKPAEKISNGDDILNEEISD
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtccttcggacccctgcggcccctcgtcctccggggcgccgccg
gagaagcggagggagagggagggagaggacggagcccccggtgtcagcaccggggggagc
accgcggtggagacggtcatcaaactgggaggggtgtccaactcagaagaacaagacatc
agggctctccagacaaagaaccgaaagttgggagaatctcttgatcaaagacaggtcatt
gaggatgaattgcgagagcgaattgagagactggagacccgccaggccactgatgatgcc
agtctgctgatcctcaacagatactggaaccagtttgatgaaaacgttcaactgaccatc
agacgttatgaccaagcgagcagcgagcctgagaaatctcagactggtgagggacggagc
ctgaaaccggatactccagaacctgatggcgactccaaccaggagcgggccaaggacaga
ggcaaccagggagagccaaacaactctttcctggccacgttggcgagcagcagcagtgag
gagatggaggctgagctccaggagagggtggagaaaagccagaagcaggccagccacgtg
gtggagatttatgagtgtctgaagaggaccgtggaccaactgaagacagagctggactct
ggagctgacagcagtctgtggcaggcagcttccaaacagaatacactcctgaccaatgaa
aacaagcggctacaacagctgacagaggactttaagcagaagcacagtcacatgaccagt
cagactcgtcctctgggtcgtgcggctaacaaagcggaccagcgtgtcagcgagctgcag
gtcctgatcgaggagctgcagtgggacatggagaagatccgccgccgcgagaacagactg
aacgctcacctgactgagatactggagagggtgaacagcaaaggctataaggtgtgtggg
gaggccagcagcgtgtgtgggaccatcactattaacaagagaaagtttgaagaaatgaac
agtgatatggaggagaacacggagctggcagacaaccgcttcgtcgagctgcagaagctc
cagcaggacctgcagactgtgcaccaggagaacaacaacatgaaggcggagttgctgatc
cgagcagagggcgtggtcaaagagacttctgagtatcgctgcttacagtcacagttttct
gtgctctacaacgagtctctgatcctgaagtctcagttagatgagacacgtgctcgtctc
aacaccaccaggacggcgaggctccgacagctggagcacatggagaatgacgaggtggct
ctgcagaggaaggttcgtacggaggtgtttcagctggaggacacactggctcaagtcagg
aaggagtacgagatgttgcgcattgagtttgaacagacgcttgctgccaacgagcaagca
ggtcccatcaacagggagatgcgtcacctgatcagcacgttgcaaacacacaaccagcag
atgaaggtagaggtggtgaaatacaagatcagactgagagagacgcaagctgagctcaac
caggtccgcgcctcaaagggaaatgccatcctccagtcccagtccagcacagagatggac
gtgaaggatgagaccacctctccttcgacaccagccgtctccggggagcccgtggtcaaa
tcagaggctgacaacggctcctccacacccagcagcacgggagcctctgtgaaaactgag
cctggagcagaacccgaagcaaccgtaaaagaggaggagaaagatgagaagaaagaaaag
gaggaaaagagagaaaaggacattataaagaaagaggagaaagacagagagcgtgagaaa
gagaaggaaaaggagagagagaggccaactcgcagcagtgggagcagcagtgtgatgaag
gaggagaggaccggctgcagccagccggaggagttagccggggagcgcccctccatcggg
gggtccaagaggaaagagatggagcagctgaagatcataagagccgaactcaagaaagcc
caggagtcccagcgggagatgaagctgctgctggacatgtaccgctcagcgccaaaggag
cagagggacaaggtccagctcatggctgcagagaagaagtccaagtcagagggagaggag
ctgcggcagaggctgagggagcttgaggagagggagaggagggagggcaaaaagatggcg
gatgaagaagctctgaggaagatccgctctgtggaggagcagatcgacatcctcaacaag
aagctctccatagccaaacaggaggaggacgccctgctgagcgagatggacgtgacgggg
caggccttcgaggacatgcaggaacagaacatccgtctgatgcagcagctcagggaaaaa
gacgatgccaacttcaagctgatgagcgagcggatcaagtccaaccagatccataagctg
ctgaaagaggagaaggaggagctggcagaccaactgctgactttaaaaactcaggtggat
gcccagctgcaggtggtgaggaagcttgaggaaaaggagcgcctcctgcagggcaccatc
agcactgctgagagagagctggcccttcgaacacaagcgttagacatgaacaaacgcaag
gctcaggagtctgcggtgctgtcggaggaggtgcgaacccagctggagcaagttcagcag
aggctcaaactggtcagagaggaggtcatagagaacagcatctccagggagaaagagtcc
tttaacgccagacgagcacaggaggacatctccaaactaaggggaaagatcgagaaggcc
aagaaacccgcagagaaaatcagcaacggagacgacatccttaatgaagaaatcagtgac
tataaggcgcgcctaacgtgtccttgctgcaactcccgggtgaaggacgcagtcctgaca
aagtgcttccacgtcttctgcttcgagtgcgtaaagacgcgctacgacacacgccagagg
aagtgccccaagtgcaacgccgccttcggagcgaacgacttccaccgcatatacatcggc
taa
DBGET
integrated database retrieval system
