Notothenia coriiceps (black rockcod): 104946080
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Entry
104946080 CDS
T04920
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104946080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104946080
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
NGL family
104946080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
104946080
NCBI-ProteinID:
XP_010770139
UniProt:
A0A6I9MVX2
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLIRLEELEMSGNQLTVVKPSAF
LGLVNLQKLWMMHAQIQTLERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPAVYKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGSLNFTSVSMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIESPGDYSQTPLPPFGWVS
SSTTKGTPISTRTTERTYTIPVLDPDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSSYHH
GPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctattcgtgctgcttttggcccttcagatcctggtcgttgct
gggctggttcgcgctcagacctgtccttctgtctgctcatgcagcaatcagttcagcaaa
gtaatatgcacccgccgaagtctacgggacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagtttcaaacatctg
cgccatctggagatcctgcagctaagcaaaaaccacattcgcaacattgaaattggcgcc
tttaatggactggccagtctcaacactttggagctctttgataatcggctcacgacaatc
cccaatggagcatttgagtacctgtccaagctgaaggaattgtggctaaggaacaacccg
atcgaaagtataccatcttatgccttcaaccgagtcccctcgcttcgaaggctggatcta
ggtgagctcaaacgtctctcttacatttctgatggagccttcaaggacttgagcaacctg
cgctacctaaacctgggaatgtgcaacctcaaggagatccctaacattttacctttgatc
aggcttgaagagctagaaatgtcaggaaaccagctaactgttgtcaagcccagcgcgttt
ttaggattagtgaacctccagaagctgtggatgatgcatgcccagatacaaactttagag
aggaattcctttgatgaccttcagtctctggtggagctcaacctagctcacaacaacctt
acctttctaccacatgacctcttcacaccgttgcatcgcctggagcgggtccacctccat
cacaacccttggaactgcaactgtgatatcctgtggctcagctggtggctgaaggagaca
gtacctgctaatactagctgctgcgcccgttgccattcgcctgcagtctataaaggtcgc
tacattggggaattggaccacagctacttccagtgcgatgttcctgtcattgtggagcca
cccagtgacttgaatgtgacagaaggcatgggtgcagagcttaaatgtcgtacaagctcg
ctgacgtccatcagctggcttacaccaaatggctcgctggtgacacatggggcttacaag
gtacgtttgtccgtactcaatgatgggtcactgaactttactagtgtctccatgcaggac
actgggacttacacctgtatggtaagcaacacagcaggcaacatttctgcctctgctgtg
cttaatgtcacttctgtggaaaacagcggggtgacctattttaccacagtcactgtggag
accattgagtccccgggggactatagccaaacgccacttcccccatttggctgggtgtca
tcctcgacaacaaaaggtactcctatttccacaaggaccacagagcggacttacaccatt
ccagttcttgatccggatggagagggagccctcaatggcctggatgaggtgatgaaaact
accaagattatcattggctgcttcgtggccataacactaatggctgctgttctgctggta
attttctacaagatgaggaagcaacataaccagcaggatcctgatggccctgcctcctcc
atggaggtcattacagttgaagaagagcttgcgggtgttgctgccatggagagacaccta
tcgctgcctcctctggagcactacaaccactacaacacctacaagagcagttaccaccac
ggtcctatgctcagtaccatacacagctcagccacacaggaacctttactgattcaagct
tgctcaaaagacaatgtacaagagacccaaatctga
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