Notothenia coriiceps (black rockcod): 104946113
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Entry
104946113 CDS
T04920
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04145
Phagosome
ncc04514
Cell adhesion molecule (CAM) interaction
ncc04517
IgSF CAM signaling
ncc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104946113
04517 IgSF CAM signaling
104946113
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104946113
09142 Cell motility
04810 Regulation of actin cytoskeleton
104946113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104946113
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104946113
04515 Cell adhesion molecules [BR:
ncc04515
]
104946113
04090 CD molecules [BR:
ncc04090
]
104946113
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104946113
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104946113
Cell adhesion molecules [BR:
ncc04515
]
Integrins
Integrin beta subunits
104946113
CD molecules [BR:
ncc04090
]
Proteins
104946113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
vWA_SIBA-E
VWA_4
DUF424
Motif
Other DBs
NCBI-GeneID:
104946113
NCBI-ProteinID:
XP_010770177
UniProt:
A0A6I9N0Q7
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
NFTKAGEQEAVRCDTKALLMKRGCKREEIISPENTLVIVKADRLSVSFDKQLKQPVQLTP
QKISLRLRPGLPTTFRVSFKRVQGYPVDLYYLMDLSYSMKDDLANVKELGKDLFAALKSI
TNSAQIGFGAFVDKTVLPFTNTNKEKLLKPCDENDQQCQAAFGYRHVLSMTSEEEKFKTK
VTEEFISGNLDSPEGSLDAMMQAAVCGERIGWRNSSTRLIVLTTDAGFHMAGDGKLAGIL
EPNDEKCHIERSLYTKSNEMDYPSVGQLAIQLEKNNIQPIFAVTKNVEDVYKQLTKLIPK
SEVGVLSSDSKNVVQLIKEAYKRLSSKVTVTHDNLPEHVSVVYTPNCKGAGPAGESEGIC
DNVPVGEEVSSF
NT seq
1117 nt
NT seq
+upstream
nt +downstream
nt
aattttacaaaagcaggtgagcaggaagcggtgcgctgtgacaccaaagctctgttgatg
aagagaggctgcaagagggaagaaatcatctccccggagaacactctagtcattgtgaag
gcagaccgtctgtctgtgtcattcgacaaacagctgaaacagcctgttcagctgacacca
cagaagattagtttgagactgcgacctgggcttcctacgacattcagggtttctttcaaa
agagttcagggttatcctgttgatctctactacctgatggacctgtcttactccatgaaa
gatgacttggcaaatgtcaaagaactgggaaaagatctttttgcagctctgaagagtatc
actaattctgctcaaataggatttggtgcgtttgttgataagacagttcttcctttcact
aacaccaacaaggagaaactgctgaagccgtgtgatgagaatgaccaacagtgccaggct
gcctttggctacagacatgtgcttagtatgacgtcagaagaagaaaagttcaagacaaaa
gtaacagaggagttcatttctgggaacttggactctccagaaggtagtctggacgccatg
atgcaggcagccgtgtgtggggaaagaataggttggaggaacagcagcactcggctgatt
gtgctgaccactgatgccggattccacatggccggagatggaaaattagctggcatactg
gaacccaatgatgaaaagtgccacatagaaaggagcttgtacaccaaaagcaatgaaatg
gactacccatctgttggacaactagccattcagttggaaaaaaacaatattcagccgata
tttgcagtgacaaaaaatgtggaggatgtgtacaagcaactcactaaattgattccgaaa
tcagaggtgggagttctgtcatcagattcaaaaaatgtggttcaattgatcaaggaggcc
tacaaaaggttgtcctccaaagtgactgtgacccatgacaatctgcctgagcatgtgagc
gttgtctacacccctaactgcaagggtgcaggaccagcaggggagagcgaagggatttgt
gataatgtaccagtgggagaggaggtcagttctttct
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