KEGG   Notothenia coriiceps (black rockcod): 104946113
Entry
104946113         CDS       T04920                                 
Name
(RefSeq) integrin beta-2-like
  KO
K06464  integrin beta 2
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04145  Phagosome
ncc04514  Cell adhesion molecule (CAM) interaction
ncc04517  IgSF CAM signaling
ncc04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    104946113
   04517 IgSF CAM signaling
    104946113
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104946113
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104946113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104946113
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104946113
   04515 Cell adhesion molecules [BR:ncc04515]
    104946113
   04090 CD molecules [BR:ncc04090]
    104946113
Membrane trafficking [BR:ncc04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    104946113
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104946113
Cell adhesion molecules [BR:ncc04515]
 Integrins
  Integrin beta subunits
   104946113
CD molecules [BR:ncc04090]
 Proteins
  104946113
SSDB
Motif
Pfam: Integrin_beta vWA_SIBA-E VWA_4 DUF424
Other DBs
NCBI-GeneID: 104946113
NCBI-ProteinID: XP_010770177
UniProt: A0A6I9N0Q7
LinkDB
Position
Unknown
AA seq 372 aa
NFTKAGEQEAVRCDTKALLMKRGCKREEIISPENTLVIVKADRLSVSFDKQLKQPVQLTP
QKISLRLRPGLPTTFRVSFKRVQGYPVDLYYLMDLSYSMKDDLANVKELGKDLFAALKSI
TNSAQIGFGAFVDKTVLPFTNTNKEKLLKPCDENDQQCQAAFGYRHVLSMTSEEEKFKTK
VTEEFISGNLDSPEGSLDAMMQAAVCGERIGWRNSSTRLIVLTTDAGFHMAGDGKLAGIL
EPNDEKCHIERSLYTKSNEMDYPSVGQLAIQLEKNNIQPIFAVTKNVEDVYKQLTKLIPK
SEVGVLSSDSKNVVQLIKEAYKRLSSKVTVTHDNLPEHVSVVYTPNCKGAGPAGESEGIC
DNVPVGEEVSSF
NT seq 1117 nt   +upstreamnt  +downstreamnt
aattttacaaaagcaggtgagcaggaagcggtgcgctgtgacaccaaagctctgttgatg
aagagaggctgcaagagggaagaaatcatctccccggagaacactctagtcattgtgaag
gcagaccgtctgtctgtgtcattcgacaaacagctgaaacagcctgttcagctgacacca
cagaagattagtttgagactgcgacctgggcttcctacgacattcagggtttctttcaaa
agagttcagggttatcctgttgatctctactacctgatggacctgtcttactccatgaaa
gatgacttggcaaatgtcaaagaactgggaaaagatctttttgcagctctgaagagtatc
actaattctgctcaaataggatttggtgcgtttgttgataagacagttcttcctttcact
aacaccaacaaggagaaactgctgaagccgtgtgatgagaatgaccaacagtgccaggct
gcctttggctacagacatgtgcttagtatgacgtcagaagaagaaaagttcaagacaaaa
gtaacagaggagttcatttctgggaacttggactctccagaaggtagtctggacgccatg
atgcaggcagccgtgtgtggggaaagaataggttggaggaacagcagcactcggctgatt
gtgctgaccactgatgccggattccacatggccggagatggaaaattagctggcatactg
gaacccaatgatgaaaagtgccacatagaaaggagcttgtacaccaaaagcaatgaaatg
gactacccatctgttggacaactagccattcagttggaaaaaaacaatattcagccgata
tttgcagtgacaaaaaatgtggaggatgtgtacaagcaactcactaaattgattccgaaa
tcagaggtgggagttctgtcatcagattcaaaaaatgtggttcaattgatcaaggaggcc
tacaaaaggttgtcctccaaagtgactgtgacccatgacaatctgcctgagcatgtgagc
gttgtctacacccctaactgcaagggtgcaggaccagcaggggagagcgaagggatttgt
gataatgtaccagtgggagaggaggtcagttctttct

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