Notothenia coriiceps (black rockcod): 104946163
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Entry
104946163 CDS
T04920
Symbol
cacna1d
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04020
Calcium signaling pathway
ncc04218
Cellular senescence
ncc04260
Cardiac muscle contraction
ncc04261
Adrenergic signaling in cardiomyocytes
ncc04270
Vascular smooth muscle contraction
ncc04530
Tight junction
ncc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104946163 (cacna1d)
04020 Calcium signaling pathway
104946163 (cacna1d)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104946163 (cacna1d)
09144 Cellular community - eukaryotes
04530 Tight junction
104946163 (cacna1d)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104946163 (cacna1d)
09153 Circulatory system
04260 Cardiac muscle contraction
104946163 (cacna1d)
04261 Adrenergic signaling in cardiomyocytes
104946163 (cacna1d)
04270 Vascular smooth muscle contraction
104946163 (cacna1d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104946163 (cacna1d)
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104946163 (cacna1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
CAC1F_C
GPHH
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
104946163
NCBI-ProteinID:
XP_010770235
UniProt:
A0A6I9N842
LinkDB
All DBs
Position
Unknown
AA seq
2024 aa
AA seq
DB search
MALAVYVPFPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNML
DFVIVVIGLFSVVLELLTKEDKVEVELEGEINHPSGHGHAGKPGGGFDVKALRAFRVLRP
LRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGVD
TIAEEEPAPCAISGHGRQCPINGSVCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWT
DVLYWMNDAMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLRE
KQQLEEDLKGYLDWITQAEDIDPDNEDEADETKRNRVTLADLTEKKKGRFGWFSQSSDTH
ASVPASETESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSV
PFYWLVIILVFLNTLTISSEHYNQPMWLTQVQDVANKVLLTLFTCEMLTKMYSLGLQCYF
VSLFNRFDCFVVCGGITETILVELAIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASL
LNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILT
GEDWNAVMYDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNT
DEPKKGDKKEDEKEEKEEEEEIEDTAAEEEEDPEVPSGPRPVISELVKKEKITPIPEGSA
FFIFSTTNPFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSDRNIILGYFDYA
FTAIFTVEIVLKVLGYADYVFTSMFTFEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGV
SLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLL
QFMFACIGVQLFKGKFYRCTDEGKSNSEECKGTYILYKDGDVNQPSIHRRMWHNSEFNFD
NVLMAMMALFTVSTFEGWPSLLYKAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMN
IFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNST
GFEYIMFVLIMLNTLCLAVQHYGQSALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYF
ADAWNTFDALIVVGSVVDIAITEVNKLVEPTETPVVDEQGNTEDSARISITFFRLFRVMR
LVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKVAMVDGTHINR
NNNFQTFPQAVLLLFRCATGEAWQEIMLACIAGKLCDPDSDYSPGEEMTCGSGFAIIYFI
SFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDV
VTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGN
LEQSNEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEE
GLVGAHPTQNNTAIALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGG
LFGNHLMNGGHRRSNGHQTNATQRPLQVQPPPHYAHMDQPVGRLSRANAMSHPNQHHHHH
HNRHHNSYGKSPKSTNINLNNANVSSLPNGGHHRYYEHAPPNGYPGLRSSYYDYEKPRTP
QGQRRYYETYVRSHGVDGHHPTIRREEEFEEDRLSGEYYSGEEFYEDDSMLSGERYPNSD
TEYETPKGYHHPDSYYDDDEQLLYRDSRRSPKRRLLPATPQGHRRPSFNFECLRRQGSQD
ELPHQRTALPLHLMQQQVMAVAGLDSSRAHRLSPARSTRSWATPPATPGSKDQSPYYTPL
IRVDQKHRGSVASSQVSVRKSSWYTDDPEFSQRTYSPVHLQVPPEFHNQYHQKRGSATSL
VEAVLISEGLGRYAKDPKFVTATKHEIADACEMTIDEMESAASHLLNGGMAPSANGVNVF
PILTPRDYDLQDTAASYSDEEPETEPRAPYEEDLADEMICITTL
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
atggccttagctgtgtatgtacccttcccagcagatgattccaactccacaaaccatgac
ctggaaacagtcgagtatgccttcctcatcattttcacaattgagacctttctgaagatt
atcgcttatggtttggtgatgcaccaaaacgcttacgtgagaaacggttggaacatgctg
gatttcgtcattgtcgtcataggactcttcagtgttgtcttggagcttttgaccaaagaa
gataaggtagaagttgaattagaaggagaaatcaaccatccgtcagggcatggtcacgca
ggaaaacccggaggtggattcgatgttaaagcccttcgagcctttcgtgtgctgcgaccc
ctgcggctggtctcaggagttcccagtttacaggtggtattgaactccatcattaaagcc
atggtccctctgctccacattgccctcctggtcttgtttgtcatcatcatctatgctatt
attggcctggagcttttcatcggtaaaatgcacgcaacctgctttattcctggcgtggac
acgatagcagaagaggaaccagctccatgtgcgatctcagggcacgggcgccaatgcccc
atcaacggcagcgtgtgcagggaaggctggcacggtccaaacggaggcatcaccaacttt
gacaacttcctgtttgccatgctcacagtgtttcagtgtatcaccatggagggctggacg
gacgtgctgtactggatgaacgatgctatgggcttagagcttccatgggtttactttgtc
agtcttgtgatcttcggctcctttttcgttcttaacctggttttgggtgtgttgagcgga
gagttttccaaggagagagagaaagccaaagcccggggagacttccagaagctgcgggag
aagcagcagctggaggaggatctgaagggttacttggactggatcactcaggccgaggac
atcgacccggacaacgaggatgaggccgatgaaaccaagcgcaaccgggtgactctggct
gaccttactgagaagaagaaaggaaggtttgggtggttcagccagtcgtccgacactcat
gcgagcgttccagcgagcgaaacagaatctgtgaacacagagaaccaaaacggggaggat
gaaaagacaccatgctgcggacctctgtgtcaaaaaatttcaaagtcaaagttcagtcgg
cgctggcgtcgctggaacaggttctgccgcaggaagtgccggttggccgtcaaatcggtg
cctttctattggctggtcatcatcctggtgttcctcaacacactcaccatatcatcagag
cattacaaccagcccatgtggctgacacaagtgcaggatgtagccaacaaggtgctgcta
accctgttcacatgtgaaatgttgacgaagatgtacagtcttgggctacagtgctacttt
gtgtccttgttcaaccgctttgactgcttcgtggtgtgtggaggaatcactgaaaccatc
ctggtggagctggcaatcatgtctcctctcggtatctctgtgttccgctgcgtccgcctg
ctgagaatcttcaaggtcacacgtcactggcagtctctaagtaacttggtggcgtctctg
ctcaactccatgaagtccatcgcttccctgctgctgctgctcttcctcttcatcatcatc
ttctcgctgctaggcatgcaggtctttggtggaaagttcaactttgacgagacccagacc
aagaggagtacattcgacaactttccccaagccctcctcacagtgtttcagatcctgacc
ggagaagactggaacgctgtgatgtacgatggcatcatggcgtacggaggcccttcctct
tctgggatgattgtgtgcttttacttcatcatcctcttcatctgcggaaactatatcctg
ctgaacgtcttcttggctatcgctgtggacaacttggcagacgcagagtctctcaacaca
gacgaacccaagaaaggggacaaaaaggaggacgaaaaagaggaaaaggaggaagaggag
gagattgaggacactgcagcggaggaggaggaggatccagaagttccatcagggcctcgg
ccggtcatctctgaactggtaaagaaggagaagatcacccctatcccagagggaagtgcc
ttcttcatcttcagcaccaccaacccgtttcgggtgttttgccacaaactcatcaaccac
cacatattcaccaacctcatcctggtgttcatcatgctcagctctgtctctcttgctgct
gaggatcccatccgaaacttctcagatcgcaatattatacttggttactttgactatgct
ttcacggctatctttactgttgagatcgtattgaaggtcctaggctatgcagattatgtc
ttcactagtatgtttacatttgagatcgtattgaagatgacaacatatggagcctttctc
cataaaggggcattctgtagaaattacttcaacctcctcgacctgttggtggtgggggtt
tcccttgtctcctttggcattcagtcctcggccatctcagtggtgaagattcttagggtc
cttcgtgttcttcgacccctgagggccatcaatcgggccaaaggcctaaagcacgtggtg
cagtgtgtgtttgtggccatcagaactatcggaaacatcatgatcgtcaccactctgctc
cagttcatgttcgcctgtataggggtgcagctatttaagggaaagttctaccgctgcacg
gatgaaggaaagtccaactcagaagagtgcaagggcacgtacatcctgtataaggatgga
gatgtgaaccagccgtccatccacagacgaatgtggcacaacagcgaattcaactttgat
aacgtcctcatggctatgatggctctgttcactgtgtccacctttgaaggctggccttct
ttgctctacaaggcaatcgactccaacagggagaacctgggacccatttacaactaccgc
gtggagatttccatcttcttcattatctacatcatcatcattgctttcttcatgatgaac
atctttgtaggttttgtgatcgtcacatttcaggaacaaggagaaaaagagtacaaaaac
tgtgaactcgataaaaatcagcgtcagtgtgtggagtacgctctgaaggcccgtccactg
aggaggtacatccctaagaacccgtaccagtacaagttctggtacgtggtgaactccacc
gggtttgagtacatcatgtttgtgctcattatgctcaacacgctctgcctggctgtacag
cactacggccagtcagcgctctttaactacgtaatggacattctcaatatggtcttcact
gctgtcttcactgtggaaatggttctcaaactcatcgctttcaagcccaggcactatttc
gctgatgcttggaacacattcgatgccttaattgttgtcggtagtgtcgtcgatattgct
atcactgaagttaataaacttgtagagccaacggagacacctgtggtggatgagcagggg
aacacggaggacagcgctcgcatctcaatcaccttctttcgactgtttcgagtaatgcga
ctggtcaagctcctcagcagaggggaaggcattcgcaccctcctttggacttttatcaaa
tccttccaggcgctgccctatgttgctcttctgatagccatgctgttcttcatctacgct
gtcattggcatgcaggtgtttggaaaggttgccatggtggacggcacacacatcaacaga
aacaacaacttccagactttccctcaggctgtgctcctcctcttcaggtgtgccactgga
gaggcgtggcaggagatcatgttggcctgtatagcagggaaactgtgtgacccagattcc
gactacagccccggggaggagatgacgtgtggcagtggatttgcaataatttacttcatc
agcttctacatgctttgcgccttcttgattatcaacttgttcgtggccgtcatcatggac
aactttgactatctgacacgtgattggtccattcttggtccacaccacctcgatgaattc
aaaagaatttggtcagagtacgaccccgaggccaagggcagaattaagcatctggatgtt
gtgacacttcttcgtcgcatccagcctcctctcggcttcggcaagctgtgccctcacaga
gtcgcttgcaagaggctggtagctatgaacatgcctctaaacagtgacggcacggtcatg
tttaacgccactttatttgcactggtgcgcactgccctgaagatcaaaacagaaggtaat
ctagagcagtccaacgaagagctgcgagctgtcatcaagaaaatctggaagagaactagc
atgaagctcctggatcaagttgtgccccctgctggtgatgatgaggtaaccgtggggaag
ttctatgccaccttcctgatacaggactactttaggaaattcaagaaacgtaaagaggaa
ggcctggtgggtgctcacccgacgcagaacaacacagctatcgctctacaggctggcctt
cgcaccctgcatgatatcgggcccgaaattcgccgagcgatatcatgtgatctgcaggat
gacgagctagtagactttattccagaggaagacgaggaaatttataggcgtaacggggga
ctctttggtaaccatctcatgaacggtggtcatcggcgatccaacggccaccagaccaac
gccacgcagagacctctgcaggtgcagcctccgccccactacgcccacatggaccagccg
gtgggacgcctatctcgagctaacgcaatgtcccaccccaaccaacatcaccaccaccat
cacaaccgccaccacaactcctacggcaaatctccaaaatccaccaacattaacctcaac
aacgccaacgtgtccagcctgcctaacggaggacaccatcggtactatgagcatgcaccg
cccaacggctacccaggtctccgcagctcctactacgactacgagaagccccggaccccc
cagggtcaaaggcgctactatgagacctatgttaggtcacatggagtcgatggacaccac
cccaccatccgcagggaggaggagtttgaagaagaccggctctccggggagtattacagc
ggggaggagttctatgaagacgatagtatgctttcaggagagaggtatcccaacagtgac
accgagtatgagactcccaaaggttatcatcaccctgacagttactatgacgatgacgag
cagctgctttaccgcgactcacggaggtcaccaaagagacggttactgcctgccacgcct
caaggtcacaggaggccatccttcaactttgagtgtctgcgcagacaaggtagccaggac
gagcttccacaccagcgcactgctctgccactgcacctcatgcagcaacaggtcatggcc
gtagcaggcctggactccagcagagcccaccgcctctccccagcccgctccacccgctcc
tgggccacgccccccgccactccgggcagtaaggaccagtcgccatactacacccctctc
atccgagtggaccagaaacacagggggagcgtcgccagcagccaagtgtctgtgcgcaag
agctcctggtacacggacgacccggagttctcccagaggacgtactcccccgtccacctg
caggtgcctccggagttccacaaccagtaccaccagaagagaggcagcgccaccagcctc
gtggaagcggttttgatatcagaagggcttgggaggtatgccaaggatcccaagttcgtc
actgccacaaagcacgagattgcagatgcgtgtgagatgacgatagatgagatggagagt
gcggccagccacctgctgaacggagggatggccccgagcgccaacggggtcaacgtgttc
cccatcctgactccaagggactatgacctgcaggacactgcagccagctacagcgacgaa
gagccagagacagaacctagagctccttatgaggaggacctggcagacgagatgatctgc
atcacgactttatag
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integrated database retrieval system
