Notothenia coriiceps (black rockcod): 104946165
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Entry
104946165 CDS
T04920
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04260
Cardiac muscle contraction
ncc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104946165
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104946165
04261 Adrenergic signaling in cardiomyocytes
104946165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104946165
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104946165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
WAK_assoc
dCache_2
Caps_syn_GfcC_C
VWA_CoxE
CobT_C
Motif
Other DBs
NCBI-GeneID:
104946165
NCBI-ProteinID:
XP_010770242
UniProt:
A0A6I9N0Y2
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MLGKWSLLFSHMCSSSSSLLLLWTLVGLDVVEVSGSQPGIPLSVVKLWASAFGGEIKSIS
AKYSGSQLLQKDLWAITAPRPGTNSSSEPGSPVKGRINPKNAACLAAWEESGGIRGSPRK
HGESFQTAYRKRLLGPNLGPPCTEKYKEPEKSVRVEEIDGVKLVKNLALKLEEVFWKKAE
ATRRLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGGEFLLEPNDHFNNLS
VNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQY
PGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILIDVSGSMKGLRLTIARQTVSSILD
TLGDDDFFNVIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLKKLFAKGIGLLGVALAE
AFTILNEFNQTGRGSLCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFA
DNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQA
HKLKDKSGPSLMTTVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYA
FAITNNGYILMHPDLRPLYQDGKKRRKPNYSSVDLSEVEWEDKDDILRNAMVKRRTGTFS
MEVKKTVDGGRRVLKMHNDYFYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQ
PDVALADEWTYCNTEEQHEHRHLTQIQAIKMFMTGRRTHLKCDRELIQEVLFDAVVTAPL
EAYWTGLALNKSENSDKGVEIAFLGTRAGLSRTNLFVPADQLSNQDFLTAEEKEGVFNAD
HFPLWYKRAAEQVPGAFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLE
FFQRKFWTACRQCTALDGKCGISCDSADINCYLIDNNAFILVTEEPSQTGLFFGEVEGAV
MNKLLQMGSFKRSETQHHISLSPKLIH
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaagtggagcctcctgttctcgcacatgtgcagcagtagcagcagcctgctc
ctgctctggaccctcgtcgggctggatgtggtggaggtgtcggggtcccagccagggatc
cctctgtcagtcgtgaagctctgggcttctgcatttggtggagaaataaaatcaatttct
gcaaaatattctggatcccaactccttcaaaaggatctgtgggccatcacagcaccacgt
ccagggaccaactccagctctgagcccggatccccggtcaagggcaggattaacccaaaa
aatgctgcatgtcttgcagcgtgggaggagagcggaggaatcagaggaagtccacgcaaa
catggggagagctttcaaacggcatatagaaagcgactcctgggtccaaacctaggacct
ccttgcactgagaaatataaagaacctgaaaagtcagtcagagttgaagaaattgatggg
gtgaagctggtcaagaacctggctttgaagctggaggaagtgttctggaaaaaagcagag
gcaaccaggcggctggtggaggcagcagaagaagcgcaccatcagcatgaagataatccc
gacctgcagtacgagtacttcaacgccgtgctgatcaatgaggtggatgaggagggcaat
aacgtagagctcggcggagagttcctcctggagcccaacgaccatttcaataacctgtca
gtcaacctgagcctcagtgtggtgcaggtgccgaccaacatgtacaacaaagatcctgat
atagtgaacggggtttactggtccgaggctctgaataaagtatttgtggataattttgaa
agagacccaacgctgatctggcagtactttgggagcgccaaaggtttcttcaggcagtac
cctggagtaaagtggcatccagatgaacatggtgtgattggatttgactgtagaaacagg
aagtggtatattcaagcagcaacgtcccctaaagatgtagtcatcttaatcgatgtgagt
ggaagcatgaaaggactgaggctgaccatcgccaggcagacggtctcctccatattagac
acacttggagatgatgacttcttcaatgtcattgcatataatcaggagatccactatgtg
gagccttgtttgaatggcactctggtccgagccgaccggaccaataaagaccatttccgc
gaacatctgaaaaagctgtttgctaaggggatcgggctgctgggcgtcgctctggctgaa
gcgttcacaatcctgaatgaatttaatcaaactggacgtggcagtttgtgcagccaggcc
ataatgctcgtgactgacggggcgacagaaatgtatgacgacgtttttgagaagtacaac
tggccagaaagaaaggtgcgaatattcccgtacctgattggacgagagtctgcatttgct
gataacctcaagtggatggcttgtgccaacaaaggatatttcagtcagatctccacgcta
gcagatgttcaggagaacgtgatgagatatctgcacgtcatgagccgcccgaaggtcatc
gaccacgagcacgacacggtgtggactgaagcttacgtggacagtgctctttcccaggct
cataagttgaaggacaaatcgggcccaagtctgatgaccacagtcgccatgcctgtcttc
agcacaaagaatgaaacgaagaaccaggggattctgttgggggttgcaggaacagacatc
cctttgcaggagctgatgaagcttatccctaaacatatgttaggaatccatgggtacgct
tttgctatcacaaacaacggctacatcctgatgcacccggacctcaggcctttgtatcag
gatggcaagaagaggaggaagcccaactacagcagcgtggatctctccgaggtggagtgg
gaagacaaagatgatattctacgcaacgctatggtaaaaaggaggacagggactttctct
atggaggtgaagaagacggtggatggagggaggcgtgtcctgaagatgcacaatgactat
ttctacactgacatcaaaggaacgccgttcagtgttggggtggccctctccagaggtcat
gggaagtacttcttcagaggaaatgtctcagttgaagccgggctccgtgatctggaacag
ccagatgtcgccctggcagatgaatggacttactgcaacacagaggagcagcacgagcac
cgacacctgacccagattcaagccatcaagatgtttatgacgggccgcagaacacacctc
aaatgtgaccgagaactgatccaggaagtgttgtttgatgctgtggtcaccgctccgctg
gaggcctactggactggactggccctcaacaagtcagagaactcagacaaaggagtggag
attgccttcctgggtacgcgcgccggcctctcgaggaccaacctgtttgtcccggccgat
cagctgtccaatcaagacttcctgacggcggaggaaaaggagggtgtgtttaacgccgat
cacttccctctgtggtacaaacgagcggcagaacaggtccccggggcctttgtgtactcc
atccccttcagcacagcgttagaaaataaaagtgtggtcttggccagcactgcaatccag
ctcctcgatgacagaaagtctccaatcgttgccgctgtagggatccagatgaagctcgag
ttctttcagaggaagttctggacggcctgcagacagtgtaccgctctggatggaaaatgt
ggcattagctgtgatagcgcggacattaactgctatctcattgacaacaatgccttcatt
ctcgtcacagaggagccctctcagacagggctcttcttcggagaggtggagggtgcagtt
atgaacaaacttctccaaatggggtccttcaaaaggtcagagacacaacatcacatttct
ctgagccctaaactgatacattaa
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