Notothenia coriiceps (black rockcod): 104946177
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Entry
104946177 CDS
T04920
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104946177
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104946177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
104946177
NCBI-ProteinID:
XP_010770257
UniProt:
A0A6I9N0Z8
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MGQKDHEEAGAGLILALGLDLEYLHVAGAERQAGCSDGPPAMEEQGESPGSCSPTNDPEE
NGGSDAECEPAPSPSDPDGGLTLSKITHQPLCRTQCVDLGTDGPPELPSEVKDDTPAQPS
PSSPCTLPPPEPPCAASSSEPALEGGGKEYQAKLEFALKLGYSEETVRLVLSKLGPDTLI
NDILGELVKLGTKSEAEQPVGSLASTSSSSSSSSSCGCSDLLESQRSDSPCPSDSLGDQD
NLRPVVLDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITVFVPAWRKEQSRPDAPI
TDQETLRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEK
PEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMPEQKKQPCPYGKKCT
YGHKCKYYHPERGAQPQRAVADELRAIAKSCVTTKNQGDTGLVKSHSVPAGSLDAKKGAQ
KRQSDPSIRALSYSDAEEKLARGRAESQKSSMCGSSSGSVTMSTAPGGPPSCFSLPQEQQ
SRSVTPHSLPAPSHDLYPHCESPDLSYYSVTRAYSGLSLSSRRSPDCRFPADSDLRLGSM
GSAGSECGSESSVSCGSSCDSYSERPCPACPADTLMEDNVHFANPHSRLYPHHAASNHEL
CGLHPADYANIQHGYHLARGQSCAHDQPPPEAPPKRPLYPLPPHLQHQPLTARSSCPGDY
HSLPQSSPHPPGSPFGRCLAPTRGESVSDSHLYEHHSTSHHHPRTKALPGWDSYYRQPPL
PPSRYEPSAYQSLPDTRQSSWHARPWAQEGYTQHHSSHPALHPSSTHYLNHPPPPAHSPH
PPHPSSAPLPPYPPHLTMPSHATSSYMPQHPESPAHSHYGDMREKVYVNLCNIFPSELVS
RVMARSPHITDPQQLAAAILAAKAQTGY
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgaggaggcaggagcgggactcatcctggccctggggctggat
ctggagtacctccacgtagcaggggccgagcggcaggctggctgctctgacgggccccct
gccatggaggagcagggggagagccccggcagctgtagccccaccaacgacccggaggaa
aatggagggtcggatgcagagtgcgagccggcgccttctcccagcgacccagacggaggc
ttgactctcagtaagatcacgcaccagccgctctgtcggacccagtgtgtggacttgggc
accgacggccctcctgagctcccatcagaagttaaagatgacaccccagcccagccttca
cccagctccccctgtacgctccccccacctgagcctccgtgcgccgcctcctcatcagag
ccggccctcgagggcggaggaaaggagtaccaggccaagctggagttcgccctgaagctg
ggatactcggaggagacggtgcgcctggtgctgtccaagctcggccccgacaccctcatc
aacgacatcctgggagagctggtcaaactgggcaccaagtcagaggcagagcagccggtc
ggatcgttagcctctacctcctcctcttcatcgtcctcttcctcttgtggctgttctgat
ctgctggagagccagaggtcggactcgccctgtccgtcagattctctgggcgaccaggac
aacctgcggcccgtggtgctggacggcagtaatgtagccatgagccatggcaacaaggaa
gtgttttcctgccaaggcatccagctggcagttgattggttcctcgaacgtggccatcat
gacatcacagtgtttgtgccagcgtggaggaaagagcagtcccgccccgacgccccaata
acagatcaggagaccctgcgtcgcctggaaaaggagaagatcctggtcttcactccttct
cgccgcgtccaaggtcggcgcgtggtttgctatgacgaccgcttcatcgtcaagctggcc
tatgagtcagacggcatcatcgtctccaatgacaactaccgagacctggctaatgagaag
ccggagtggaagaagttcatcgatgagcggctgctcatgtactcctttgtcaatgacaaa
ttcatgcccccagatgaccctcttggtcgtcacggccccagtttagacaacttcctgcgg
aaaagacctgtcatgcctgagcagaagaaacagccttgcccctacggaaagaagtgcact
tacggccacaaatgtaagtactaccacccagagagaggtgctcagcctcagcgtgccgta
gctgatgagctgcgtgccattgccaaatcttgtgtcaccacaaagaaccagggggacact
gggttggttaagagccacagtgtgccagctggcagccttgatgctaaaaaaggcgcccag
aaaaggcagtcagacccgagcatccgagccctgtcgtacagcgacgcggaggagaagttg
gccagagggagggcggaaagccagaagagcagtatgtgtggcagtagcagtgggagtgta
accatgtctacggctccagggggccctccgtcctgttttagccttccccaggagcagcag
tccagatctgtgactcctcatagtctcccagccccgagccacgacctttaccctcactgt
gagtctccagacttgagctactactctgtgactcgcgcgtactccggcctgagcctctcc
tccagacgcagccctgactgtcgcttccccgccgactcagacctgcgtctgggctccatg
ggctccgctggctctgaatgcggcagtgaaagcagcgtgagttgcggcagcagctgcgac
tcgtacagcgagaggccgtgtcctgcctgccccgcggacacattaatggaagacaacgtc
cattttgctaaccctcacagcagattgtatccccatcatgccgcgtcgaaccacgagctg
tgcggccttcatcctgcagattacgccaacatccagcacggctaccacctggcccgcggg
cagagctgtgctcacgaccagcccccccccgaggctcccccaaagcgccccctctacccg
ctgcctcctcacctccagcaccagccgctgaccgctcgctccagctgcccgggcgactac
cactctctgccccagtccagccctcacccccccggctctcctttcgggcgctgcctggct
ccgacgcgaggggaaagcgtgtcagactcgcatctttacgaacaccactctacatcgcac
catcacccccggacaaaagcgctgcccggctgggactcttactacagacagcctccattg
ccgccgtccaggtacgagccgtcggcctatcagagcctgccggacacccgccaatcatcc
tggcacgcccgtccctgggcccaggaaggctacacccagcaccactcctcccacccagcg
ctccacccatcctccacacattacttgaaccaccccccgcctccagcccactctcctcac
cctcctcatccatccagcgctcctctcccaccgtacccgcctcacctaacaatgccctct
cacgccacttcctcctacatgccgcagcacccggaatcccctgcacacagccactacggg
gacatgagggagaaggtgtacgtcaacctgtgcaacatcttcccctcggagctggtgagc
cgggtgatggccaggagcccccacatcacagacccccagcagctggcagccgctatactt
gcagcgaaagcccaaacaggctactga
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