Notothenia coriiceps (black rockcod): 104946246
Help
Entry
104946246 CDS
T04920
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104946246 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104946246 (xrcc5)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104946246 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
104946246
NCBI-ProteinID:
XP_010770334
UniProt:
A0A6I9MWM0
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MAGSKSALVLCMDVGFSMSNSAPGEEPAFELAKKVIQKFVQRQVFKETKDELALVLFGTD
STNNSLDQDDQYQHISVHRHLMVPDFELLEEIENKIHPESQQADWLDALVVCMDLLKKET
QGKKCDRLNVVLLTDLNTQASSEQLDVIIENLKQADITLQFFLPFPAEEDEEVGGDAGEG
GPCHPGTGKGLSREQQSGLDMVKHIMLSLDEEDGLTEIYSFRKAIEQLCMFKRIERKPMA
WPCQLTIGSCLSIRIVGYKAVTEEKLKKIWATVDAQSNQKDDVKRETVYCLDDDNETEVP
KEDTIQGFRYGSDIVPFDKIDQEHMKYKHDGKSFAVLGFAKQNMIRRHQFMGTQVIKIFP
GRDDEHAGVALSALIRALDELNMVAIIRYAYDRRCNPQVGAAFPCIKLDYECLMYIQLPF
MEDLRQYTFPSFENNKKFTPSDTQLSAVDSLIDSMMLVEKDENGDEKDMYKVHNIPNPSF
QRHFQCVHHRAVCPGTPLPPMEPWLKAALERPDIITERCQAPLEEVKRKFPLTEVEKKKK
VKTSAQIFGKDSEEPGAKKAKEEEDEEDYSLANIAEGPVTSVGSVDPARDFRTLLKKKSL
SFGEVCQQLTHRIEQLLGNKNTHYYMKSITCIEAFREQSVKLGDASLYNGYLQSLKRSIP
NRGLEVFWDLLVQDAITLISKDEVEGSTVSKSESNQFLVTEEKKEEAAAPPAEDTGDVDD
LLDMM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttccaaatcagcgttggtgttgtgcatggatgttgggttctccatgtccaac
tccgccccgggtgaagagcctgcctttgaacttgccaaaaaagtcattcagaagtttgtc
cagcgccaggtttttaaagagaccaaggatgagctggctttagttctgtttggcacagac
tccaccaacaactcactggatcaggacgaccagtaccagcacatcagcgtgcatcgtcac
ctcatggtgcctgactttgagcttctggaggaaatagagaataagatccatccagagagt
cagcaggctgattggctggatgctcttgttgtgtgcatggatctcctaaagaaagaaaca
caggggaaaaagtgtgatcgtctcaacgttgtcctcctgactgacctcaacacgcaggcc
agctcagagcagctcgatgtcattattgaaaacctgaaacaagccgacatcaccctgcag
ttctttttgcccttccctgcggaggaagatgaagaggttggaggagatgctggcgaagga
ggcccctgtcacccaggcacaggaaaaggtctgtccagggaacagcagagtggcctggac
atggtgaaacacatcatgctgagcctggatgaggaggacggcttgactgaaatttactcc
ttcaggaaagcaatcgagcagttgtgcatgttcaagcgcatcgagaggaaacccatggcc
tggccctgtcaactgaccatcggtagctgtctgtctatccgtatcgttggatacaaagca
gtgacagaagagaaactgaagaagatatgggctacagtcgatgctcaatcaaatcagaag
gacgacgtgaagagagagactgtctactgcctggatgatgacaatgagacagaggtgcca
aaggaggataccatccaaggttttcgttatggaagtgatattgttcccttcgacaaaatt
gatcaagagcatatgaaatacaagcacgacgggaaaagctttgctgttctcggatttgcc
aaacagaacatgatacgtcgccatcagttcatggggactcaagtcatcaagatttttcct
ggcagagatgatgagcatgcaggagttgcactgtccgctctcatccgagcactagatgaa
ctcaacatggtggccattatacgttacgcgtatgaccgacgctgcaaccctcaagtagga
gcagccttcccgtgcatcaagctggactatgagtgcctgatgtacatccagctgcccttc
atggaagacctgagacagtatacattcccttcctttgaaaacaacaaaaagttcactccg
tcagacacccagctgtctgctgtggactctcttattgactccatgatgctggttgagaag
gatgaaaacggggatgaaaaggatatgtacaaggtccataacattcccaacccgtccttc
cagaggcacttccagtgtgtgcatcatcgggcagtatgtcccggcaccccgcttcccccc
atggagccgtggctgaaggctgctctcgagcgccctgatatcattactgaacgctgccag
gctccactcgaggaggtgaagaggaagtttcctctcacagaagtggagaagaagaagaag
gtcaagaccagtgcacagatatttggcaaagactctgaggagccaggtgccaagaaggcc
aaagaagaggaagacgaggaggattatagcctggctaacatcgctgaaggccctgttact
tcggtgggaagcgtggatccagccagagacttccggactctgctcaagaagaagagtctt
tcatttggagaggtctgtcagcaactgactcacaggatagagcagttgcttggcaacaag
aacacacactactacatgaaaagcatcacctgcatcgaggcttttagagagcagtctgtt
aagctgggggatgccagtctgtacaatggctacctgcagtccctgaaaagaagcatccca
aaccgagggctggaggtcttctgggacctgcttgttcaagatgccataacactgatcagc
aaggacgaggttgaaggaagcactgtgtccaaaagtgaatctaatcagtttctggttact
gaggagaagaaggaagaggcagctgcacctcctgctgaagatactggagatgttgatgac
ttgctggacatgatgtaa
DBGET
integrated database retrieval system
