Notothenia coriiceps (black rockcod): 104946315
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Entry
104946315 CDS
T04920
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104946315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104946315
04131 Membrane trafficking [BR:
ncc04131
]
104946315
03029 Mitochondrial biogenesis [BR:
ncc03029
]
104946315
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104946315
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104946315
mRNA cycle factors
P-body specific factors
104946315
Membrane trafficking [BR:
ncc04131
]
Others
Actin-binding proteins
Myosins
104946315
Mitochondrial biogenesis [BR:
ncc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104946315
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104946315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
DUF5382
Ac76
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
104946315
NCBI-ProteinID:
XP_010770405
UniProt:
A0A6I9N8K4
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MLSFYRGATESILSSCITLRFGSCTASKRKSLQRIVNSAQRVIGASLPSLQDIYNTSLTH
KALGVVGDSTHPSNCLSSLLPSGRRFHSLRSSSTRLRNSFLHQAGCSQFPLLVELFQDGE
KAISPTGQGPGTGGRTRLSVKPAKGRESSSKENKKTVGCQFRNSLAMLMETLNATTPHYV
RCIKPNDFKLAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKD
VLTDKRLTCRNVLEKLVEDQDKYQFGKTKIFFRAGQVAYLEKLRAEKLRVACIRIQKTIR
CWLERKRYLRKRSAAITVQRFTRGYQARRLVKFMRRTQAATTIQKYHRMVVERRRYRQKQ
AAALVVQTLLRAYMARQMYQSLLREQKVVIIQKRVRGWLARCWYKRCLESIVYLQCCFRR
MKARRQLKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDEQKENHKVVKDRLVGMETSFT
AESEKLRAEVSRLRGVEEDAKTKGIRLNSLQEELEKLMKELTTTRKEKKTIEDWAKTYRG
EMEKMVSELKKQNGTLTKDNNDLNRMIQEQSQQMTDKMAHAIVQETQQLETDLNEERSRY
QNLLREHLLMEEKYDDLKEAMASSNASKPGHRRKDSTHSSNESEYTYNSEYAELEEGSRA
AEDVTRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFHRARARDDVEFKKARGAEL
EYESLKRQELDSENKKLKHDLVEIRQSLLGKAGPGAGAPGSPAYKVVLEQLNSSCEELEV
RKEEVLILRSQLVSQKEAMHHKDEKETMTEPSVYAEDVSKLKDSDEIKQAYVGLKDTNRL
LEHQLQTQRRGYDNDVESLRGELQNVKEDNNRQQQLLAQNLQLPPEARIEASLQHEITRL
TNENLELLAEDPEASREARVKILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAG
QTEGQTSPGQVVDEPIHPVNIPRREKDFQGMLEYNKEDELKLVKNLILELKPRGVAVNLI
PGLPAYILFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFL
HCLKQYSGDEAFMKHNTTRQNEHCLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPSI
VSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELM
KQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMVCGAKETLE
PLIQAAQLLQVKKKTDEDAEAICSMCLALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQ
TRLRDRCVSPQLLMDTKMIYPVTFPFSPSSLALETIQVPSSLNLAFLTRV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctttctaccgaggcgccactgagagcatcctcagcagctgcatcacgctgcgg
tttggaagctgcaccgcctccaagcgcaagagcctgcagcgcattgtgaactctgcccag
agggtcatcggtgcctcgctcccatcactacaggacatttataacaccagcctcactcac
aaagcactcggcgttgtgggtgactccacccacccctccaactgcctctccagcctcctg
ccttcagggagaaggttccacagcctccgctcgagctccactaggctgaggaacagcttc
ctccaccaggcgggctgttcccagttccccctgctggtggagttgttccaggacggggag
aaagccatcagtcccacgggccagggccccggcaccggaggacggacccgcctcagcgtc
aaacctgccaagggccgcgagagcagcagcaaggagaacaagaagaccgtcggctgccag
tttcgtaactccctggcaatgctgatggaaacgttgaacgcaaccaccccgcactacgtc
cgctgcatcaaacccaatgacttcaagttggccttcacgtttgatcctaagcgtgcggtg
cagcagctcagagcctgcggagtcctggaaaccatcaggatctctgctgcagggttcccc
tccagatggacgtaccaggagttcttcagccgttacagagtgctgatgaagcagaaggac
gtgttaactgacaagaggttgacctgcagaaatgttctggagaaactggtggaggaccag
gataaatatcagtttggtaagaccaagatcttcttcagagccggccaggtggcctacctg
gagaagttgagggcagagaagttgcgtgttgcctgcatccgcatccagaaaaccatccgc
tgctggctggagcgcaagaggtatctgcgcaaacgcagcgccgccatcaccgtccagagg
ttcaccagagggtaccaggcccgccgcctcgtcaagttcatgcgtcgcacgcaggcagcc
accaccatccagaagtaccacaggatggttgtggagaggagacgctaccggcagaagcag
gctgctgctctcgtcgtgcagaccctcctccgagcgtacatggcccggcagatgtaccaa
tcgttgctgcgggagcaaaaggtggtgatcatccagaagcgagtgcgcggctggttggct
cgctgctggtacaagcgctgcctggagtccatcgtctacctgcagtgctgtttccgcagg
atgaaggcccggcgccagctgaagaagctgaagatcgaggctcgctcagtggagcacttc
aagaagctcaacaagggcatggagaacaagatcatgcagctgcagaggaaaatcgacgag
cagaaagagaaccataaggtggtcaaagacagactggtgggtatggagacttccttcacg
gcggagagcgagaagctgcgtgcagaggtgagccggctgcggggggtggaggaagacgcc
aaaaccaaaggcatccggctgaactcgctgcaggaggagctggagaagctgatgaaggag
ctgactaccactcggaaagagaagaagaccatagaggactgggccaaaacctacaggggg
gagatggagaagatggtctcggagctgaagaagcagaacggcaccctgacgaaggacaac
aacgacctgaaccggatgattcaggaacagagtcagcagatgacggacaaaatggctcac
gcgatcgtacaggaaacccagcagctcgagaccgacctgaatgaggaacggtctcgttac
cagaatctattgagggagcacctgcttatggaggagaaatatgacgacctgaaggaggcg
atggcttcctcgaacgcctccaagcctggtcacaggagaaaagattccacgcacagcagc
aacgaatcagagtacacatacaactcggagtacgccgaattggaggaaggttcccgtgct
gcggaagatgtgactcggggaatagacacgtcgctgaccctgaagctgcagaagcgcctc
accgagctcgagcaagagaagcagtctctgcgcaacgagctggaaaacaaagaggaccag
ttccatcgggctagagccagggatgacgttgagtttaaaaaggctcgtggagcagagctg
gagtacgagtcactgaagcgccaggagctggattcggagaacaagaagctgaaacatgac
ctggtggagattaggcaaagcctgctgggtaaagctggtccaggcgccggggccccaggc
tccccagcctacaaggtggtgttggagcagctgaactcctcctgtgaggagctggaggtc
cgtaaggaggaggtgttaatcctgcgctcacagctggtcagccagaaggaggccatgcac
cacaaggatgagaaggaaaccatgaccgagccctcagtctatgcggaggatgtttccaag
ctgaaggactctgacgaaatcaagcaagcctacgtagggcttaaagacaccaacaggtta
ctggagcaccagcttcagactcagcggcgaggctacgataacgatgtggagtcgttgcgt
ggcgagctgcagaacgtgaaggaggacaacaaccgccagcagcagctcttagcccagaac
ctgcagctgcctccagaggcccgcatcgaggccagcctgcagcacgagatcacccgcctc
accaacgagaacctggagctcctggctgaagaccccgaagcatccagagaggctcgagtc
aagattttacgacggatggttgacctaatggagcagctggagaaacaggaccgaaccatc
cgcaagctgaagaagcagctgaaggtttactccaagaggatcggagagatgggagcgggt
caaaccgagggacagacgtctccgggacaggtggtggatgagccgattcatcctgtcaac
attccccgcagggagaaagatttccaagggatgctggagtacaacaaggaggatgagctc
aaactggtcaagaacctcatcctggagctgaagcctcgaggtgtagctgtgaatctgatc
ccaggtctgccggcctacatcctgttcatgtgtctgagacatgccgactacgtcaatgat
gaccagaaggtccgcaccctgctcacctccaccatcaacagtatcaagaagatcctgaag
aaacgaggagacgactttgagaccgtctccttctggctatccaacacctgccgtttcttg
cattgcctcaaacagtacagcggagacgaggccttcatgaagcacaacacgacgaggcag
aacgaacactgtctgtccaacttcgacctggcagagtaccgacaggtgatcagcgacctg
gccatccagatctaccagcagctcatcaagtgcatggagaacatcctgcagcccagtata
gtgtctggcatgctggagcacgagaccatccagggcgtgtcgggggtgaagcccacgggt
ctccgtaagaggacgtccagcatcgcggacgagggcacctacaccctggactccatcctg
cggcagctcagcgccttccactccaccatgtgccagcacggcaccgaccccgagctcatg
aagcaggtggtgaagcagcagttttacataatcggggctgtcaccctcaacaacctgctg
ctgcgcaaagacatgtgctcctggagcaaaggcatgcagatcaggtacaacgtaagccag
cttgaggagtggctcagggacaaagggctgatggtgtgcggggcgaaggaaacgctggag
cctctaatccaggccgctcagctgctgcaggtaaagaagaagaccgacgaggacgccgag
gccatctgctccatgtgcctggccctcaccacggctcagattgtgaaggtcctaaacctt
tatacaccagtcaacgagtttgaggagagggtatcagtgtcattcatacgaaccatacag
actcgtttgcgcgaccgttgtgtgagtccccagttgttgatggacaccaagatgatttac
ccggtcaccttcccattcagcccgtcctcacttgccctggaaaccatccaggtccccagc
tctcttaacctggccttcctcacacgtgtctaa
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integrated database retrieval system
